Chennubhotla C - Search Results

1

Biologically Relevant Heterogeneity: Metrics and Practical Insights.

Gough A, Stern AM, Maier J, Lezon T, Shun TY, Chennubhotla C, Schurdak ME, Haney SA, Taylor DL. Gough A, et al. Among authors: chennubhotla c. SLAS Discov. 2017 Mar;22(3):213-237. doi: 10.1177/2472555216682725. Epub 2017 Jan 6. SLAS Discov. 2017. PMID: 28231035 Free PMC article. Review.

2

Harnessing Human Microphysiology Systems as Key Experimental Models for Quantitative Systems Pharmacology.

Taylor DL, Gough A, Schurdak ME, Vernetti L, Chennubhotla CS, Lefever D, Pei F, Faeder JR, Lezon TR, Stern AM, Bahar I. Taylor DL, et al. Among authors: chennubhotla cs. Handb Exp Pharmacol. 2019;260:327-367. doi: 10.1007/164_2019_239. Handb Exp Pharmacol. 2019. PMID: 31201557 Free PMC article.

3

Evol and ProDy for bridging protein sequence evolution and structural dynamics.

Bakan A, Dutta A, Mao W, Liu Y, Chennubhotla C, Lezon TR, Bahar I. Bakan A, et al. Among authors: chennubhotla c. Bioinformatics. 2014 Sep 15;30(18):2681-3. doi: 10.1093/bioinformatics/btu336. Epub 2014 May 21. Bioinformatics. 2014. PMID: 24849577 Free PMC article.

4

Spectral clustering strategies for heterogeneous disease expression data.

Huang GT, Cunningham KI, Benos PV, Chennubhotla CS. Huang GT, et al. Pac Symp Biocomput. 2013:212-23. Pac Symp Biocomput. 2013. PMID: 23424126 Free PMC article.

5

Anisotropic fluctuations of amino acids in protein structures: insights from X-ray crystallography and elastic network models.

Eyal E, Chennubhotla C, Yang LW, Bahar I. Eyal E, et al. Among authors: chennubhotla c. Bioinformatics. 2007 Jul 1;23(13):i175-84. doi: 10.1093/bioinformatics/btm186. Bioinformatics. 2007. PMID: 17646294

6

Markov propagation of allosteric effects in biomolecular systems: application to GroEL-GroES.

Chennubhotla C, Bahar I. Chennubhotla C, et al. Mol Syst Biol. 2006;2:36. doi: 10.1038/msb4100075. Epub 2006 Jul 4. Mol Syst Biol. 2006. PMID: 16820777 Free PMC article.

7

Markov methods for hierarchical coarse-graining of large protein dynamics.

Chennubhotla C, Bahar I. Chennubhotla C, et al. J Comput Biol. 2007 Jul-Aug;14(6):765-76. doi: 10.1089/cmb.2007.R015. J Comput Biol. 2007. PMID: 17691893

8

Signal propagation in proteins and relation to equilibrium fluctuations.

Chennubhotla C, Bahar I. Chennubhotla C, et al. PLoS Comput Biol. 2007 Sep;3(9):1716-26. doi: 10.1371/journal.pcbi.0030172. PLoS Comput Biol. 2007. PMID: 17892319 Free PMC article.

9

Coupling between global dynamics and signal transduction pathways: a mechanism of allostery for chaperonin GroEL.

Chennubhotla C, Yang Z, Bahar I. Chennubhotla C, et al. Mol Biosyst. 2008 Apr;4(4):287-92. doi: 10.1039/b717819k. Epub 2008 Feb 20. Mol Biosyst. 2008. PMID: 18354781

10

Elastic network models for understanding biomolecular machinery: from enzymes to supramolecular assemblies.

Chennubhotla C, Rader AJ, Yang LW, Bahar I. Chennubhotla C, et al. Phys Biol. 2005 Nov 9;2(4):S173-80. doi: 10.1088/1478-3975/2/4/S12. Phys Biol. 2005. PMID: 16280623

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