Zheng SC - Search Results

1

Correcting for cell-type heterogeneity in epigenome-wide association studies: revisiting previous analyses.

Zheng SC, Beck S, Jaffe AE, Koestler DC, Hansen KD, Houseman AE, Irizarry RA, Teschendorff AE. Zheng SC, et al. Nat Methods. 2017 Feb 28;14(3):216-217. doi: 10.1038/nmeth.4187. Nat Methods. 2017. PMID: 28245219 Free PMC article. No abstract available.

2

Epigenetic drift, epigenetic clocks and cancer risk.

Zheng SC, Widschwendter M, Teschendorff AE. Zheng SC, et al. Epigenomics. 2016 May;8(5):705-19. doi: 10.2217/epi-2015-0017. Epub 2016 Apr 22. Epigenomics. 2016. PMID: 27104983 Review.

3

DNA Methylation Signatures in Vaginal Fluid Samples for Detection of Cervical and Endometrial Cancer.

Doufekas K, Zheng SC, Ghazali S, Wong M, Mohamed Y, Jones A, Reisel D, Mould T, Olaitan A, Macdonald N, Teschendorff AE, Widschwendter M. Doufekas K, et al. Among authors: zheng sc. Int J Gynecol Cancer. 2016 Jun 2. doi: 10.1097/IGC.0000000000000739. Online ahead of print. Int J Gynecol Cancer. 2016. PMID: 27258725

4

The multi-omic landscape of transcription factor inactivation in cancer.

Teschendorff AE, Zheng SC, Feber A, Yang Z, Beck S, Widschwendter M. Teschendorff AE, et al. Among authors: zheng sc. Genome Med. 2016 Aug 25;8(1):89. doi: 10.1186/s13073-016-0342-8. Genome Med. 2016. PMID: 27562343 Free PMC article.

5

Correlation of an epigenetic mitotic clock with cancer risk.

Yang Z, Wong A, Kuh D, Paul DS, Rakyan VK, Leslie RD, Zheng SC, Widschwendter M, Beck S, Teschendorff AE. Yang Z, et al. Among authors: zheng sc. Genome Biol. 2016 Oct 3;17(1):205. doi: 10.1186/s13059-016-1064-3. Genome Biol. 2016. PMID: 27716309 Free PMC article.

6

A comparison of reference-based algorithms for correcting cell-type heterogeneity in Epigenome-Wide Association Studies.

Teschendorff AE, Breeze CE, Zheng SC, Beck S. Teschendorff AE, et al. Among authors: zheng sc. BMC Bioinformatics. 2017 Feb 13;18(1):105. doi: 10.1186/s12859-017-1511-5. BMC Bioinformatics. 2017. PMID: 28193155 Free PMC article.

7

Cell-type deconvolution in epigenome-wide association studies: a review and recommendations.

Teschendorff AE, Zheng SC. Teschendorff AE, et al. Among authors: zheng sc. Epigenomics. 2017 May;9(5):757-768. doi: 10.2217/epi-2016-0153. Epub 2017 Mar 14. Epigenomics. 2017. PMID: 28517979 Free article. Review.

8

A novel cell-type deconvolution algorithm reveals substantial contamination by immune cells in saliva, buccal and cervix.

Zheng SC, Webster AP, Dong D, Feber A, Graham DG, Sullivan R, Jevons S, Lovat LB, Beck S, Widschwendter M, Teschendorff AE. Zheng SC, et al. Epigenomics. 2018 Jul;10(7):925-940. doi: 10.2217/epi-2018-0037. Epub 2018 Apr 25. Epigenomics. 2018. PMID: 29693419 Free article.

9

Cell and tissue type independent age-associated DNA methylation changes are not rare but common.

Zhu T, Zheng SC, Paul DS, Horvath S, Teschendorff AE. Zhu T, et al. Among authors: zheng sc. Aging (Albany NY). 2018 Nov 27;10(11):3541-3557. doi: 10.18632/aging.101666. Aging (Albany NY). 2018. PMID: 30482885 Free PMC article.

10

Identification of differentially methylated cell types in epigenome-wide association studies.

Zheng SC, Breeze CE, Beck S, Teschendorff AE. Zheng SC, et al. Nat Methods. 2018 Dec;15(12):1059-1066. doi: 10.1038/s41592-018-0213-x. Epub 2018 Nov 30. Nat Methods. 2018. PMID: 30504870 Free PMC article.

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