Zhou Y - Search Results

1

Systems-level understanding of ethanol-induced stresses and adaptation in E. coli.

Cao H, Wei D, Yang Y, Shang Y, Li G, Zhou Y, Ma Q, Xu Y. Cao H, et al. Among authors: zhou y. Sci Rep. 2017 Mar 16;7:44150. doi: 10.1038/srep44150. Sci Rep. 2017. PMID: 28300180 Free PMC article.

2

Specific interactions for ab initio folding of protein terminal regions with secondary structures.

Yang Y, Zhou Y. Yang Y, et al. Among authors: zhou y. Proteins. 2008 Aug;72(2):793-803. doi: 10.1002/prot.21968. Proteins. 2008. PMID: 18260109

3

Ab initio folding of terminal segments with secondary structures reveals the fine difference between two closely related all-atom statistical energy functions.

Yang Y, Zhou Y. Yang Y, et al. Among authors: zhou y. Protein Sci. 2008 Jul;17(7):1212-9. doi: 10.1110/ps.033480.107. Epub 2008 May 9. Protein Sci. 2008. PMID: 18469178 Free PMC article.

4

An all-atom knowledge-based energy function for protein-DNA threading, docking decoy discrimination, and prediction of transcription-factor binding profiles.

Xu B, Yang Y, Liang H, Zhou Y. Xu B, et al. Among authors: zhou y. Proteins. 2009 Aug 15;76(3):718-30. doi: 10.1002/prot.22384. Proteins. 2009. PMID: 19274740 Free PMC article.

5

Predicting continuous local structure and the effect of its substitution for secondary structure in fragment-free protein structure prediction.

Faraggi E, Yang Y, Zhang S, Zhou Y. Faraggi E, et al. Among authors: zhou y. Structure. 2009 Nov 11;17(11):1515-27. doi: 10.1016/j.str.2009.09.006. Structure. 2009. PMID: 19913486 Free PMC article.

6

Structure-based prediction of DNA-binding proteins by structural alignment and a volume-fraction corrected DFIRE-based energy function.

Zhao H, Yang Y, Zhou Y. Zhao H, et al. Among authors: zhou y. Bioinformatics. 2010 Aug 1;26(15):1857-63. doi: 10.1093/bioinformatics/btq295. Epub 2010 Jun 4. Bioinformatics. 2010. PMID: 20525822 Free PMC article.

7

Structure-based prediction of RNA-binding domains and RNA-binding sites and application to structural genomics targets.

Zhao H, Yang Y, Zhou Y. Zhao H, et al. Among authors: zhou y. Nucleic Acids Res. 2011 Apr;39(8):3017-25. doi: 10.1093/nar/gkq1266. Epub 2010 Dec 22. Nucleic Acids Res. 2011. PMID: 21183467 Free PMC article.

8

Highly accurate and high-resolution function prediction of RNA binding proteins by fold recognition and binding affinity prediction.

Zhao H, Yang Y, Zhou Y. Zhao H, et al. Among authors: zhou y. RNA Biol. 2011 Nov-Dec;8(6):988-96. doi: 10.4161/rna.8.6.17813. Epub 2011 Nov 1. RNA Biol. 2011. PMID: 21955494 Free PMC article.

9

Template-based structure prediction and classification of transcription factors in Arabidopsis thaliana.

Lu T, Yang Y, Yao B, Liu S, Zhou Y, Zhang C. Lu T, et al. Among authors: zhou y. Protein Sci. 2012 Jun;21(6):828-38. doi: 10.1002/pro.2066. Epub 2012 May 1. Protein Sci. 2012. PMID: 22549903 Free PMC article.

10

Prediction of RNA binding proteins comes of age from low resolution to high resolution.

Zhao H, Yang Y, Zhou Y. Zhao H, et al. Among authors: zhou y. Mol Biosyst. 2013 Oct;9(10):2417-25. doi: 10.1039/c3mb70167k. Mol Biosyst. 2013. PMID: 23872922 Free PMC article. Review.

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