Tosatto SCE - Search Results

1

Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges.

Daneshjou R, Wang Y, Bromberg Y, Bovo S, Martelli PL, Babbi G, Lena PD, Casadio R, Edwards M, Gifford D, Jones DT, Sundaram L, Bhat RR, Li X, Pal LR, Kundu K, Yin Y, Moult J, Jiang Y, Pejaver V, Pagel KA, Li B, Mooney SD, Radivojac P, Shah S, Carraro M, Gasparini A, Leonardi E, Giollo M, Ferrari C, Tosatto SCE, Bachar E, Azaria JR, Ofran Y, Unger R, Niroula A, Vihinen M, Chang B, Wang MH, Franke A, Petersen BS, Pirooznia M, Zandi P, McCombie R, Potash JB, Altman RB, Klein TE, Hoskins RA, Repo S, Brenner SE, Morgan AA. Daneshjou R, et al. Among authors: tosatto sce. Hum Mutat. 2017 Sep;38(9):1182-1192. doi: 10.1002/humu.23280. Epub 2017 Jul 7. Hum Mutat. 2017. PMID: 28634997 Free PMC article.

2

Align: a C++ class library and web server for rapid sequence alignment prototyping.

Tosatto SC, Albiero A, Mantovan A, Ferrari C, Bindewald E, Toppo S. Tosatto SC, et al. Curr Drug Discov Technol. 2006 Sep;3(3):167-73. doi: 10.2174/157016306780136754. Curr Drug Discov Technol. 2006. PMID: 17311562

3

Adding structural information to the von Hippel-Lindau (VHL) tumor suppressor interaction network.

Leonardi E, Murgia A, Tosatto SC. Leonardi E, et al. FEBS Lett. 2009 Nov 19;583(22):3704-10. doi: 10.1016/j.febslet.2009.10.070. Epub 2009 Oct 28. FEBS Lett. 2009. PMID: 19878677 Free article.

4

Identification and in silico analysis of novel von Hippel-Lindau (VHL) gene variants from a large population.

Leonardi E, Martella M, Tosatto SC, Murgia A. Leonardi E, et al. Ann Hum Genet. 2011 Jul;75(4):483-96. doi: 10.1111/j.1469-1809.2011.00647.x. Epub 2011 Apr 4. Ann Hum Genet. 2011. PMID: 21463266

5

A computational model of the LGI1 protein suggests a common binding site for ADAM proteins.

Leonardi E, Andreazza S, Vanin S, Busolin G, Nobile C, Tosatto SC. Leonardi E, et al. PLoS One. 2011 Mar 29;6(3):e18142. doi: 10.1371/journal.pone.0018142. PLoS One. 2011. PMID: 21479274 Free PMC article.

6

RepeatsDB: a database of tandem repeat protein structures.

Di Domenico T, Potenza E, Walsh I, Parra RG, Giollo M, Minervini G, Piovesan D, Ihsan A, Ferrari C, Kajava AV, Tosatto SC. Di Domenico T, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D352-7. doi: 10.1093/nar/gkt1175. Epub 2013 Dec 5. Nucleic Acids Res. 2014. PMID: 24311564 Free PMC article.

7

Design and analysis of a Petri net model of the Von Hippel-Lindau (VHL) tumor suppressor interaction network.

Minervini G, Panizzoni E, Giollo M, Masiero A, Ferrari C, Tosatto SC. Minervini G, et al. PLoS One. 2014 Jun 2;9(6):e96986. doi: 10.1371/journal.pone.0096986. eCollection 2014. PLoS One. 2014. PMID: 24886840 Free PMC article.

8

NeEMO: a method using residue interaction networks to improve prediction of protein stability upon mutation.

Giollo M, Martin AJ, Walsh I, Ferrari C, Tosatto SC. Giollo M, et al. BMC Genomics. 2014;15 Suppl 4(Suppl 4):S7. doi: 10.1186/1471-2164-15-S4-S7. Epub 2014 May 20. BMC Genomics. 2014. PMID: 25057121 Free PMC article.

9

Comprehensive large-scale assessment of intrinsic protein disorder.

Walsh I, Giollo M, Di Domenico T, Ferrari C, Zimmermann O, Tosatto SC. Walsh I, et al. Bioinformatics. 2015 Jan 15;31(2):201-8. doi: 10.1093/bioinformatics/btu625. Epub 2014 Sep 21. Bioinformatics. 2015. PMID: 25246432

10

The Victor C++ library for protein representation and advanced manipulation.

Hirsh L, Piovesan D, Giollo M, Ferrari C, Tosatto SC. Hirsh L, et al. Bioinformatics. 2015 Apr 1;31(7):1138-40. doi: 10.1093/bioinformatics/btu773. Epub 2014 Nov 19. Bioinformatics. 2015. PMID: 25414364

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