Andrabi M - Search Results

1

A tissue-specific, Gata6-driven transcriptional program instructs remodeling of the mature arterial tree.

Losa M, Latorre V, Andrabi M, Ladam F, Sagerström C, Novoa A, Zarrineh P, Bridoux L, Hanley NA, Mallo M, Bobola N. Losa M, et al. Among authors: andrabi m. Elife. 2017 Sep 27;6:e31362. doi: 10.7554/eLife.31362. Elife. 2017. PMID: 28952437 Free PMC article.

2

ZIC3 Controls the Transition from Naive to Primed Pluripotency.

Yang SH, Andrabi M, Biss R, Murtuza Baker S, Iqbal M, Sharrocks AD. Yang SH, et al. Among authors: andrabi m. Cell Rep. 2019 Jun 11;27(11):3215-3227.e6. doi: 10.1016/j.celrep.2019.05.026. Cell Rep. 2019. PMID: 31189106 Free PMC article.

3

Predicting conformational ensembles and genome-wide transcription factor binding sites from DNA sequences.

Andrabi M, Hutchins AP, Miranda-Saavedra D, Kono H, Nussinov R, Mizuguchi K, Ahmad S. Andrabi M, et al. Sci Rep. 2017 Jun 22;7(1):4071. doi: 10.1038/s41598-017-03199-6. Sci Rep. 2017. PMID: 28642456 Free PMC article.

4

ChIP-seq analysis of genomic binding regions of five major transcription factors highlights a central role for ZIC2 in the mouse epiblast stem cell gene regulatory network.

Matsuda K, Mikami T, Oki S, Iida H, Andrabi M, Boss JM, Yamaguchi K, Shigenobu S, Kondoh H. Matsuda K, et al. Among authors: andrabi m. Development. 2017 Jun 1;144(11):1948-1958. doi: 10.1242/dev.143479. Epub 2017 Apr 28. Development. 2017. PMID: 28455373 Free PMC article.

5

Prediction of mono- and di-nucleotide-specific DNA-binding sites in proteins using neural networks.

Andrabi M, Mizuguchi K, Sarai A, Ahmad S. Andrabi M, et al. BMC Struct Biol. 2009 May 13;9:30. doi: 10.1186/1472-6807-9-30. BMC Struct Biol. 2009. PMID: 19439068 Free PMC article.

6

Conformational changes in DNA-binding proteins: relationships with precomplex features and contributions to specificity and stability.

Andrabi M, Mizuguchi K, Ahmad S. Andrabi M, et al. Proteins. 2014 May;82(5):841-57. doi: 10.1002/prot.24462. Epub 2013 Nov 22. Proteins. 2014. PMID: 24265157 Free article.

7

On nucleotide solvent accessibility in RNA structure.

Singh YH, Andrabi M, Kahali B, Ghosh TC, Mizuguchi K, Kochetov AV, Ahmad S. Singh YH, et al. Among authors: andrabi m. Gene. 2010 Sep 1;463(1-2):41-8. doi: 10.1016/j.gene.2010.05.001. Epub 2010 May 12. Gene. 2010. PMID: 20470873

8

Bidirectional developmental potential in reprogrammed cells with acquired pluripotency.

Obokata H, Sasai Y, Niwa H, Kadota M, Andrabi M, Takata N, Tokoro M, Terashita Y, Yonemura S, Vacanti CA, Wakayama T. Obokata H, et al. Among authors: andrabi m. Nature. 2014 Jan 30;505(7485):676-80. doi: 10.1038/nature12969. Nature. 2014. Retraction in: Nature. 2014 Jul 3;511(7507):112. doi: 10.1038/nature13599 PMID: 24476891 Retracted.

9

Databases and QSAR for cancer research.

Malik A, Singh H, Andrabi M, Husain SA, Ahmad S. Malik A, et al. Among authors: andrabi m. Cancer Inform. 2007 Feb 15;2:99-111. Cancer Inform. 2007. PMID: 19458762 Free PMC article.

10

Retraction: Bidirectional developmental potential in reprogrammed cells with acquired pluripotency.

Obokata H, Sasai Y, Niwa H, Kadota M, Andrabi M, Takata N, Tokoro M, Terashita Y, Yonemura S, Vacanti CA, Wakayama T. Obokata H, et al. Among authors: andrabi m. Nature. 2014 Jul 3;511(7507):112. doi: 10.1038/nature13599. Nature. 2014. PMID: 24990752 No abstract available.

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