Heinäniemi M - Search Results

1

Analysis of primary microRNA loci from nascent transcriptomes reveals regulatory domains governed by chromatin architecture.

Bouvy-Liivrand M, Hernández de Sande A, Pölönen P, Mehtonen J, Vuorenmaa T, Niskanen H, Sinkkonen L, Kaikkonen MU, Heinäniemi M. Bouvy-Liivrand M, et al. Among authors: heinaniemi m. Nucleic Acids Res. 2017 Sep 29;45(17):9837-9849. doi: 10.1093/nar/gkx680. Nucleic Acids Res. 2017. PMID: 28973462 Free PMC article.

2

In vivo interrogation of regulatory genomes reveals extensive quasi-insufficiency in cancer evolution.

Fischer A, Lersch R, de Andrade Krätzig N, Strong A, Friedrich MJ, Weber J, Engleitner T, Öllinger R, Yen HY, Kohlhofer U, Gonzalez-Menendez I, Sailer D, Kogan L, Lahnalampi M, Laukkanen S, Kaltenbacher T, Klement C, Rezaei M, Ammon T, Montero JJ, Schneider G, Mayerle J, Heikenwälder M, Schmidt-Supprian M, Quintanilla-Martinez L, Steiger K, Liu P, Cadiñanos J, Vassiliou GS, Saur D, Lohi O, Heinäniemi M, Conte N, Bradley A, Rad L, Rad R. Fischer A, et al. Among authors: heinaniemi m. Cell Genom. 2023 Mar 8;3(3):100276. doi: 10.1016/j.xgen.2023.100276. eCollection 2023 Mar 8. Cell Genom. 2023. PMID: 36950387 Free PMC article.

3

Cyclical regulation of the insulin-like growth factor binding protein 3 gene in response to 1alpha,25-dihydroxyvitamin D3.

Malinen M, Ryynänen J, Heinäniemi M, Väisänen S, Carlberg C. Malinen M, et al. Among authors: heinaniemi m. Nucleic Acids Res. 2011 Jan;39(2):502-12. doi: 10.1093/nar/gkq820. Epub 2010 Sep 19. Nucleic Acids Res. 2011. PMID: 20855290 Free PMC article.

4

Time-resolved expression profiling of the nuclear receptor superfamily in human adipogenesis.

Lahnalampi M, Heinäniemi M, Sinkkonen L, Wabitsch M, Carlberg C. Lahnalampi M, et al. Among authors: heinaniemi m. PLoS One. 2010 Sep 27;5(9):e12991. doi: 10.1371/journal.pone.0012991. PLoS One. 2010. PMID: 20885999 Free PMC article.

5

Dataset integration identifies transcriptional regulation of microRNA genes by PPARγ in differentiating mouse 3T3-L1 adipocytes.

John E, Wienecke-Baldacchino A, Liivrand M, Heinäniemi M, Carlberg C, Sinkkonen L. John E, et al. Among authors: heinaniemi m. Nucleic Acids Res. 2012 May;40(10):4446-60. doi: 10.1093/nar/gks025. Epub 2012 Feb 7. Nucleic Acids Res. 2012. PMID: 22319216 Free PMC article.

6

Gene-pair expression signatures reveal lineage control.

Heinäniemi M, Nykter M, Kramer R, Wienecke-Baldacchino A, Sinkkonen L, Zhou JX, Kreisberg R, Kauffman SA, Huang S, Shmulevich I. Heinäniemi M, et al. Nat Methods. 2013 Jun;10(6):577-83. doi: 10.1038/nmeth.2445. Epub 2013 Apr 21. Nat Methods. 2013. PMID: 23603899 Free PMC article.

7

Integrated analysis of transcript-level regulation of metabolism reveals disease-relevant nodes of the human metabolic network.

Galhardo M, Sinkkonen L, Berninger P, Lin J, Sauter T, Heinäniemi M. Galhardo M, et al. Among authors: heinaniemi m. Nucleic Acids Res. 2014 Feb;42(3):1474-96. doi: 10.1093/nar/gkt989. Epub 2013 Nov 5. Nucleic Acids Res. 2014. PMID: 24198249 Free PMC article.

8

Combinatorial regulation of lipoprotein lipase by microRNAs during mouse adipogenesis.

Bouvy-Liivrand M, Heinäniemi M, John E, Schneider JG, Sauter T, Sinkkonen L. Bouvy-Liivrand M, et al. Among authors: heinaniemi m. RNA Biol. 2014;11(1):76-91. doi: 10.4161/rna.27655. Epub 2014 Jan 16. RNA Biol. 2014. PMID: 24457907 Free PMC article.

9

Role of the Keap1-Nrf2 pathway in cancer.

Leinonen HM, Kansanen E, Pölönen P, Heinäniemi M, Levonen AL. Leinonen HM, et al. Among authors: heinaniemi m. Adv Cancer Res. 2014;122:281-320. doi: 10.1016/B978-0-12-420117-0.00008-6. Adv Cancer Res. 2014. PMID: 24974185 Review.

10

Integrated metabolic modelling reveals cell-type specific epigenetic control points of the macrophage metabolic network.

Pacheco MP, John E, Kaoma T, Heinäniemi M, Nicot N, Vallar L, Bueb JL, Sinkkonen L, Sauter T. Pacheco MP, et al. Among authors: heinaniemi m. BMC Genomics. 2015 Oct 19;16:809. doi: 10.1186/s12864-015-1984-4. BMC Genomics. 2015. PMID: 26480823 Free PMC article.

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