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Design and validation of a 90K SNP genotyping assay for the water buffalo (Bubalus bubalis).
Iamartino D, Nicolazzi EL, Van Tassell CP, Reecy JM, Fritz-Waters ER, Koltes JE, Biffani S, Sonstegard TS, Schroeder SG, Ajmone-Marsan P, Negrini R, Pasquariello R, Ramelli P, Coletta A, Garcia JF, Ali A, Ramunno L, Cosenza G, de Oliveira DAA, Drummond MG, Bastianetto E, Davassi A, Pirani A, Brew F, Williams JL. Iamartino D, et al. Among authors: schroeder sg. PLoS One. 2017 Oct 5;12(10):e0185220. doi: 10.1371/journal.pone.0185220. eCollection 2017. PLoS One. 2017. PMID: 28981529 Free PMC article.
Computational detection and experimental validation of segmental duplications and associated copy number variations in water buffalo ( Bubalus bubalis ).
Liu S, Kang X, Catacchio CR, Liu M, Fang L, Schroeder SG, Li W, Rosen BD, Iamartino D, Iannuzzi L, Sonstegard TS, Van Tassell CP, Ventura M, Low WY, Williams JL, Bickhart DM, Liu GE. Liu S, et al. Among authors: schroeder sg. Funct Integr Genomics. 2019 May;19(3):409-419. doi: 10.1007/s10142-019-00657-4. Epub 2019 Feb 7. Funct Integr Genomics. 2019. PMID: 30734132
Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50).
Williams JL, Iamartino D, Pruitt KD, Sonstegard T, Smith TPL, Low WY, Biagini T, Bomba L, Capomaccio S, Castiglioni B, Coletta A, Corrado F, Ferré F, Iannuzzi L, Lawley C, Macciotta N, McClure M, Mancini G, Matassino D, Mazza R, Milanesi M, Moioli B, Morandi N, Ramunno L, Peretti V, Pilla F, Ramelli P, Schroeder S, Strozzi F, Thibaud-Nissen F, Zicarelli L, Ajmone-Marsan P, Valentini A, Chillemi G, Zimin A. Williams JL, et al. Gigascience. 2017 Oct 1;6(10):1-6. doi: 10.1093/gigascience/gix088. Gigascience. 2017. PMID: 29048578 Free PMC article.
Bovine exome sequence analysis and targeted SNP genotyping of recessive fertility defects BH1, HH2, and HH3 reveal a putative causative mutation in SMC2 for HH3.
McClure MC, Bickhart D, Null D, Vanraden P, Xu L, Wiggans G, Liu G, Schroeder S, Glasscock J, Armstrong J, Cole JB, Van Tassell CP, Sonstegard TS. McClure MC, et al. PLoS One. 2014 Mar 25;9(3):e92769. doi: 10.1371/journal.pone.0092769. eCollection 2014. PLoS One. 2014. PMID: 24667746 Free PMC article.
Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus.
Zhou Y, Utsunomiya YT, Xu L, Hay el HA, Bickhart DM, Alexandre PA, Rosen BD, Schroeder SG, Carvalheiro R, de Rezende Neves HH, Sonstegard TS, Van Tassell CP, Ferraz JB, Fukumasu H, Garcia JF, Liu GE. Zhou Y, et al. Among authors: schroeder sg. BMC Genomics. 2016 Jun 1;17:419. doi: 10.1186/s12864-016-2461-4. BMC Genomics. 2016. PMID: 27245577 Free PMC article.
62 results