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Feasibility of Prostate PAXgene Fixation for Molecular Research and Diagnostic Surgical Pathology: Comparison of Matched Fresh Frozen, FFPE, and PFPE Tissues.
Högnäs G, Kivinummi K, Kallio HML, Hieta R, Ruusuvuori P, Koskenalho A, Kesseli J, Tammela TLJ, Riikonen J, Ilvesaro J, Kares S, Hirvikoski PP, Laurila M, Mirtti T, Nykter M, Kujala PM, Visakorpi T, Tolonen T, Bova GS. Högnäs G, et al. Among authors: ruusuvuori p. Am J Surg Pathol. 2018 Jan;42(1):103-115. doi: 10.1097/PAS.0000000000000961. Am J Surg Pathol. 2018. PMID: 28984675
STAGETOOL, a Novel Automated Approach for Mouse Testis Histological Analysis.
Meikar O, Majoral D, Heikkinen O, Valkama E, Leskinen S, Rebane A, Ruusuvuori P, Toppari J, Mäkelä JA, Kotaja N. Meikar O, et al. Among authors: ruusuvuori p. Endocrinology. 2022 Dec 19;164(2):bqac202. doi: 10.1210/endocr/bqac202. Endocrinology. 2022. PMID: 36461763 Free PMC article.
Simulation of microarray data with realistic characteristics.
Nykter M, Aho T, Ahdesmäki M, Ruusuvuori P, Lehmussola A, Yli-Harja O. Nykter M, et al. Among authors: ruusuvuori p. BMC Bioinformatics. 2006 Jul 18;7:349. doi: 10.1186/1471-2105-7-349. BMC Bioinformatics. 2006. PMID: 16848902 Free PMC article.
Microarray simulator as educational tool.
Ruusuvuori P, Nykter M, Mäkiraatikka E, Lehmussola A, Korpelainen T, Erkkilä T, Yli-Harja O. Ruusuvuori P, et al. Annu Int Conf IEEE Eng Med Biol Soc. 2007;2007:5920-3. doi: 10.1109/IEMBS.2007.4353695. Annu Int Conf IEEE Eng Med Biol Soc. 2007. PMID: 18003361
Computational methods for estimation of cell cycle phase distributions of yeast cells.
Niemistö A, Nykter M, Aho T, Jalovaara H, Marjanen K, Ahdesmäki M, Ruusuvuori P, Tiainen M, Linne ML, Yli-Harja O. Niemistö A, et al. Among authors: ruusuvuori p. EURASIP J Bioinform Syst Biol. 2007;2007(1):46150. doi: 10.1155/2007/46150. EURASIP J Bioinform Syst Biol. 2007. PMID: 18354733 Free PMC article.
Leukemia prediction using sparse logistic regression.
Manninen T, Huttunen H, Ruusuvuori P, Nykter M. Manninen T, et al. Among authors: ruusuvuori p. PLoS One. 2013 Aug 30;8(8):e72932. doi: 10.1371/journal.pone.0072932. eCollection 2013. PLoS One. 2013. PMID: 24023658 Free PMC article.
Quantitative analysis of colony morphology in yeast.
Ruusuvuori P, Lin J, Scott AC, Tan Z, Sorsa S, Kallio A, Nykter M, Yli-Harja O, Shmulevich I, Dudley AM. Ruusuvuori P, et al. Biotechniques. 2014 Jan;56(1):18-27. doi: 10.2144/000114123. Biotechniques. 2014. PMID: 24447135 Free PMC article.
Recurrent SKIL-activating rearrangements in ETS-negative prostate cancer.
Annala M, Kivinummi K, Tuominen J, Karakurt S, Granberg K, Latonen L, Ylipää A, Sjöblom L, Ruusuvuori P, Saramäki O, Kaukoniemi KM, Yli-Harja O, Vessella RL, Tammela TL, Zhang W, Visakorpi T, Nykter M. Annala M, et al. Among authors: ruusuvuori p. Oncotarget. 2015 Mar 20;6(8):6235-50. doi: 10.18632/oncotarget.3359. Oncotarget. 2015. PMID: 25749039 Free PMC article.
69 results