Baker D - Search Results

1

Comprehensive computational design of ordered peptide macrocycles.

Hosseinzadeh P, Bhardwaj G, Mulligan VK, Shortridge MD, Craven TW, Pardo-Avila F, Rettie SA, Kim DE, Silva DA, Ibrahim YM, Webb IK, Cort JR, Adkins JN, Varani G, Baker D. Hosseinzadeh P, et al. Among authors: baker d. Science. 2017 Dec 15;358(6369):1461-1466. doi: 10.1126/science.aap7577. Science. 2017. PMID: 29242347 Free PMC article.

2

Contrasting roles for symmetrically disposed beta-turns in the folding of a small protein.

Gu H, Kim D, Baker D. Gu H, et al. Among authors: baker d. J Mol Biol. 1997 Dec 12;274(4):588-96. doi: 10.1006/jmbi.1997.1374. J Mol Biol. 1997. PMID: 9417937

3

The sequences of small proteins are not extensively optimized for rapid folding by natural selection.

Kim DE, Gu H, Baker D. Kim DE, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):4982-6. doi: 10.1073/pnas.95.9.4982. Proc Natl Acad Sci U S A. 1998. PMID: 9560214 Free PMC article.

4

The single helix in protein L is largely disrupted at the rate-limiting step in folding.

Kim DE, Yi Q, Gladwin ST, Goldberg JM, Baker D. Kim DE, et al. Among authors: baker d. J Mol Biol. 1998 Dec 4;284(3):807-15. doi: 10.1006/jmbi.1998.2200. J Mol Biol. 1998. PMID: 9826517

5

Robustness of protein folding kinetics to surface hydrophobic substitutions.

Gu H, Doshi N, Kim DE, Simons KT, Santiago JV, Nauli S, Baker D. Gu H, et al. Among authors: baker d. Protein Sci. 1999 Dec;8(12):2734-41. doi: 10.1110/ps.8.12.2734. Protein Sci. 1999. PMID: 10631990 Free PMC article.

6

Crystallization and preliminary X-ray diffraction studies of mutants of B1 IgG-binding domain of protein L from Peptostreptococcus magnus.

Johnsen K, O'Neill JW, Kim DE, Baker D, Zhang KY. Johnsen K, et al. Among authors: baker d. Acta Crystallogr D Biol Crystallogr. 2000 Apr;56(Pt 4):506-8. doi: 10.1107/s0907444900002195. Acta Crystallogr D Biol Crystallogr. 2000. PMID: 10739935

7

A breakdown of symmetry in the folding transition state of protein L.

Kim DE, Fisher C, Baker D. Kim DE, et al. Among authors: baker d. J Mol Biol. 2000 May 19;298(5):971-84. doi: 10.1006/jmbi.2000.3701. J Mol Biol. 2000. PMID: 10801362

8

Structures of the B1 domain of protein L from Peptostreptococcus magnus with a tyrosine to tryptophan substitution.

O'Neill JW, Kim DE, Baker D, Zhang KY. O'Neill JW, et al. Among authors: baker d. Acta Crystallogr D Biol Crystallogr. 2001 Apr;57(Pt 4):480-7. doi: 10.1107/s0907444901000373. Acta Crystallogr D Biol Crystallogr. 2001. PMID: 11264576

9

Conversion of monomeric protein L to an obligate dimer by computational protein design.

Kuhlman B, O'Neill JW, Kim DE, Zhang KY, Baker D. Kuhlman B, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10687-91. doi: 10.1073/pnas.181354398. Epub 2001 Aug 28. Proc Natl Acad Sci U S A. 2001. PMID: 11526208 Free PMC article.

10

Protein structure prediction and structural genomics.

Baker D, Sali A. Baker D, et al. Science. 2001 Oct 5;294(5540):93-6. doi: 10.1126/science.1065659. Science. 2001. PMID: 11588250

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