Yang Y - Search Results

1

Transcriptome profiling of lentil (Lens culinaris) through the first 24 hours of Ascochyta lentis infection reveals key defence response genes.

Khorramdelazad M, Bar I, Whatmore P, Smetham G, Bhaaskaria V, Yang Y, Bai SH, Mantri N, Zhou Y, Ford R. Khorramdelazad M, et al. Among authors: yang y. BMC Genomics. 2018 Jan 31;19(1):108. doi: 10.1186/s12864-018-4488-1. BMC Genomics. 2018. PMID: 29385986 Free PMC article.

2

Specific interactions for ab initio folding of protein terminal regions with secondary structures.

Yang Y, Zhou Y. Yang Y, et al. Proteins. 2008 Aug;72(2):793-803. doi: 10.1002/prot.21968. Proteins. 2008. PMID: 18260109

3

Ab initio folding of terminal segments with secondary structures reveals the fine difference between two closely related all-atom statistical energy functions.

Yang Y, Zhou Y. Yang Y, et al. Protein Sci. 2008 Jul;17(7):1212-9. doi: 10.1110/ps.033480.107. Epub 2008 May 9. Protein Sci. 2008. PMID: 18469178 Free PMC article.

4

Structure-based prediction of RNA-binding domains and RNA-binding sites and application to structural genomics targets.

Zhao H, Yang Y, Zhou Y. Zhao H, et al. Among authors: yang y. Nucleic Acids Res. 2011 Apr;39(8):3017-25. doi: 10.1093/nar/gkq1266. Epub 2010 Dec 22. Nucleic Acids Res. 2011. PMID: 21183467 Free PMC article.

5

Highly accurate and high-resolution function prediction of RNA binding proteins by fold recognition and binding affinity prediction.

Zhao H, Yang Y, Zhou Y. Zhao H, et al. Among authors: yang y. RNA Biol. 2011 Nov-Dec;8(6):988-96. doi: 10.4161/rna.8.6.17813. Epub 2011 Nov 1. RNA Biol. 2011. PMID: 21955494 Free PMC article.

6

Prediction of RNA binding proteins comes of age from low resolution to high resolution.

Zhao H, Yang Y, Zhou Y. Zhao H, et al. Among authors: yang y. Mol Biosyst. 2013 Oct;9(10):2417-25. doi: 10.1039/c3mb70167k. Mol Biosyst. 2013. PMID: 23872922 Free PMC article. Review.

7

Predicting DNA-binding proteins and binding residues by complex structure prediction and application to human proteome.

Zhao H, Wang J, Zhou Y, Yang Y. Zhao H, et al. Among authors: yang y. PLoS One. 2014 May 2;9(5):e96694. doi: 10.1371/journal.pone.0096694. eCollection 2014. PLoS One. 2014. PMID: 24792350 Free PMC article.

8

Fast and accurate non-sequential protein structure alignment using a new asymmetric linear sum assignment heuristic.

Brown P, Pullan W, Yang Y, Zhou Y. Brown P, et al. Among authors: yang y. Bioinformatics. 2016 Feb 1;32(3):370-7. doi: 10.1093/bioinformatics/btv580. Epub 2015 Oct 10. Bioinformatics. 2016. PMID: 26454279

9

Effective protein conformational sampling based on predicted torsion angles.

Yang Y, Zhou Y. Yang Y, et al. J Comput Chem. 2016 Apr 30;37(11):976-80. doi: 10.1002/jcc.24285. Epub 2015 Dec 23. J Comput Chem. 2016. PMID: 26696379

10

Natural protein sequences are more intrinsically disordered than random sequences.

Yu JF, Cao Z, Yang Y, Wang CL, Su ZD, Zhao YW, Wang JH, Zhou Y. Yu JF, et al. Among authors: yang y. Cell Mol Life Sci. 2016 Aug;73(15):2949-57. doi: 10.1007/s00018-016-2138-9. Epub 2016 Jan 22. Cell Mol Life Sci. 2016. PMID: 26801222 Free PMC article.

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