Nielsen R - Search Results

1

Origins and genetic legacies of the Caribbean Taino.

Schroeder H, Sikora M, Gopalakrishnan S, Cassidy LM, Maisano Delser P, Sandoval Velasco M, Schraiber JG, Rasmussen S, Homburger JR, Ávila-Arcos MC, Allentoft ME, Moreno-Mayar JV, Renaud G, Gómez-Carballa A, Laffoon JE, Hopkins RJA, Higham TFG, Carr RS, Schaffer WC, Day JS, Hoogland M, Salas A, Bustamante CD, Nielsen R, Bradley DG, Hofman CL, Willerslev E. Schroeder H, et al. Among authors: nielsen r. Proc Natl Acad Sci U S A. 2018 Mar 6;115(10):2341-2346. doi: 10.1073/pnas.1716839115. Epub 2018 Feb 20. Proc Natl Acad Sci U S A. 2018. PMID: 29463742 Free PMC article.

2

A maximum likelihood method for analyzing pseudogene evolution: implications for silent site evolution in humans and rodents.

Bustamante CD, Nielsen R, Hartl DL. Bustamante CD, et al. Among authors: nielsen r. Mol Biol Evol. 2002 Jan;19(1):110-7. doi: 10.1093/oxfordjournals.molbev.a003975. Mol Biol Evol. 2002. PMID: 11752196

3

The cost of inbreeding in Arabidopsis.

Bustamante CD, Nielsen R, Sawyer SA, Olsen KM, Purugganan MD, Hartl DL. Bustamante CD, et al. Among authors: nielsen r. Nature. 2002 Apr 4;416(6880):531-4. doi: 10.1038/416531a. Nature. 2002. PMID: 11932744

4

Maximum likelihood and Bayesian methods for estimating the distribution of selective effects among classes of mutations using DNA polymorphism data.

Bustamante CD, Nielsen R, Hartl DL. Bustamante CD, et al. Among authors: nielsen r. Theor Popul Biol. 2003 Mar;63(2):91-103. doi: 10.1016/s0040-5809(02)00050-3. Theor Popul Biol. 2003. PMID: 12615493

5

Simultaneous inference of selection and population growth from patterns of variation in the human genome.

Williamson SH, Hernandez R, Fledel-Alon A, Zhu L, Nielsen R, Bustamante CD. Williamson SH, et al. Among authors: nielsen r. Proc Natl Acad Sci U S A. 2005 May 31;102(22):7882-7. doi: 10.1073/pnas.0502300102. Epub 2005 May 19. Proc Natl Acad Sci U S A. 2005. PMID: 15905331 Free PMC article.

6

Ascertainment bias in studies of human genome-wide polymorphism.

Clark AG, Hubisz MJ, Bustamante CD, Williamson SH, Nielsen R. Clark AG, et al. Among authors: nielsen r. Genome Res. 2005 Nov;15(11):1496-502. doi: 10.1101/gr.4107905. Genome Res. 2005. PMID: 16251459 Free PMC article.

7

Genomic scans for selective sweeps using SNP data.

Nielsen R, Williamson S, Kim Y, Hubisz MJ, Clark AG, Bustamante C. Nielsen R, et al. Genome Res. 2005 Nov;15(11):1566-75. doi: 10.1101/gr.4252305. Genome Res. 2005. PMID: 16251466 Free PMC article.

8

Ancient DNA chronology within sediment deposits: are paleobiological reconstructions possible and is DNA leaching a factor?

Haile J, Holdaway R, Oliver K, Bunce M, Gilbert MT, Nielsen R, Munch K, Ho SY, Shapiro B, Willerslev E. Haile J, et al. Among authors: nielsen r. Mol Biol Evol. 2007 Apr;24(4):982-9. doi: 10.1093/molbev/msm016. Epub 2007 Jan 25. Mol Biol Evol. 2007. PMID: 17255121 Free article.

9

The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing.

Binladen J, Gilbert MT, Bollback JP, Panitz F, Bendixen C, Nielsen R, Willerslev E. Binladen J, et al. Among authors: nielsen r. PLoS One. 2007 Feb 14;2(2):e197. doi: 10.1371/journal.pone.0000197. PLoS One. 2007. PMID: 17299583 Free PMC article.

10

Localizing recent adaptive evolution in the human genome.

Williamson SH, Hubisz MJ, Clark AG, Payseur BA, Bustamante CD, Nielsen R. Williamson SH, et al. Among authors: nielsen r. PLoS Genet. 2007 Jun;3(6):e90. doi: 10.1371/journal.pgen.0030090. Epub 2007 Apr 20. PLoS Genet. 2007. PMID: 17542651 Free PMC article.

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