Mortensen JM - Search Results

1

Interpretation of biological experiments changes with evolution of the Gene Ontology and its annotations.

Tomczak A, Mortensen JM, Winnenburg R, Liu C, Alessi DT, Swamy V, Vallania F, Lofgren S, Haynes W, Shah NH, Musen MA, Khatri P. Tomczak A, et al. Among authors: mortensen jm. Sci Rep. 2018 Mar 23;8(1):5115. doi: 10.1038/s41598-018-23395-2. Sci Rep. 2018. PMID: 29572502 Free PMC article.

2

Applications of ontology design patterns in biomedical ontologies.

Mortensen JM, Horridge M, Musen MA, Noy NF. Mortensen JM, et al. AMIA Annu Symp Proc. 2012;2012:643-52. Epub 2012 Nov 3. AMIA Annu Symp Proc. 2012. PMID: 23304337 Free PMC article.

3

Crowdsourcing the verification of relationships in biomedical ontologies.

Mortensen JM, Musen MA, Noy NF. Mortensen JM, et al. AMIA Annu Symp Proc. 2013 Nov 16;2013:1020-9. eCollection 2013. AMIA Annu Symp Proc. 2013. PMID: 24551391 Free PMC article.

4

An empirically derived taxonomy of errors in SNOMED CT.

Mortensen JM, Musen MA, Noy NF. Mortensen JM, et al. AMIA Annu Symp Proc. 2014 Nov 14;2014:899-906. eCollection 2014. AMIA Annu Symp Proc. 2014. PMID: 25954397 Free PMC article.

5

Is the crowd better as an assistant or a replacement in ontology engineering? An exploration through the lens of the Gene Ontology.

Mortensen JM, Telis N, Hughey JJ, Fan-Minogue H, Van Auken K, Dumontier M, Musen MA. Mortensen JM, et al. J Biomed Inform. 2016 Apr;60:199-209. doi: 10.1016/j.jbi.2016.02.005. Epub 2016 Feb 10. J Biomed Inform. 2016. PMID: 26873781 Free PMC article.

6

Using description logics to evaluate the consistency of drug-class membership relations in NDF-RT.

Winnenburg R, Mortensen JM, Bodenreider O. Winnenburg R, et al. Among authors: mortensen jm. J Biomed Semantics. 2015 Mar 28;6:13. doi: 10.1186/s13326-015-0007-3. eCollection 2015. J Biomed Semantics. 2015. PMID: 25866612 Free PMC article.

7

Using the wisdom of the crowds to find critical errors in biomedical ontologies: a study of SNOMED CT.

Mortensen JM, Minty EP, Januszyk M, Sweeney TE, Rector AL, Noy NF, Musen MA. Mortensen JM, et al. J Am Med Inform Assoc. 2015 May;22(3):640-8. doi: 10.1136/amiajnl-2014-002901. Epub 2014 Oct 23. J Am Med Inform Assoc. 2015. PMID: 25342179 Free PMC article.

8

Pharmacovigilance using clinical notes.

LePendu P, Iyer SV, Bauer-Mehren A, Harpaz R, Mortensen JM, Podchiyska T, Ferris TA, Shah NH. LePendu P, et al. Among authors: mortensen jm. Clin Pharmacol Ther. 2013 Jun;93(6):547-55. doi: 10.1038/clpt.2013.47. Epub 2013 Mar 4. Clin Pharmacol Ther. 2013. PMID: 23571773 Free PMC article.

9

A nondegenerate code of deleterious variants in Mendelian loci contributes to complex disease risk.

Blair DR, Lyttle CS, Mortensen JM, Bearden CF, Jensen AB, Khiabanian H, Melamed R, Rabadan R, Bernstam EV, Brunak S, Jensen LJ, Nicolae D, Shah NH, Grossman RL, Cox NJ, White KP, Rzhetsky A. Blair DR, et al. Among authors: mortensen jm. Cell. 2013 Sep 26;155(1):70-80. doi: 10.1016/j.cell.2013.08.030. Cell. 2013. PMID: 24074861 Free PMC article.

10

High geothermal heat flux in close proximity to the Northeast Greenland Ice Stream.

Rysgaard S, Bendtsen J, Mortensen J, Sejr MK. Rysgaard S, et al. Sci Rep. 2018 Jan 22;8(1):1344. doi: 10.1038/s41598-018-19244-x. Sci Rep. 2018. PMID: 29358631 Free PMC article.

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