Winnenburg R - Search Results

1

Interpretation of biological experiments changes with evolution of the Gene Ontology and its annotations.

Tomczak A, Mortensen JM, Winnenburg R, Liu C, Alessi DT, Swamy V, Vallania F, Lofgren S, Haynes W, Shah NH, Musen MA, Khatri P. Tomczak A, et al. Among authors: winnenburg r. Sci Rep. 2018 Mar 23;8(1):5115. doi: 10.1038/s41598-018-23395-2. Sci Rep. 2018. PMID: 29572502 Free PMC article.

2

Generalized enrichment analysis improves the detection of adverse drug events from the biomedical literature.

Winnenburg R, Shah NH. Winnenburg R, et al. BMC Bioinformatics. 2016 Jun 23;17:250. doi: 10.1186/s12859-016-1080-z. BMC Bioinformatics. 2016. PMID: 27333889 Free PMC article.

3

U-Index, a dataset and an impact metric for informatics tools and databases.

Callahan A, Winnenburg R, Shah NH. Callahan A, et al. Among authors: winnenburg r. Sci Data. 2018 Mar 20;5:180043. doi: 10.1038/sdata.2018.43. Sci Data. 2018. PMID: 29557976 Free PMC article.

4

Using description logics to evaluate the consistency of drug-class membership relations in NDF-RT.

Winnenburg R, Mortensen JM, Bodenreider O. Winnenburg R, et al. J Biomed Semantics. 2015 Mar 28;6:13. doi: 10.1186/s13326-015-0007-3. eCollection 2015. J Biomed Semantics. 2015. PMID: 25866612 Free PMC article.

5

A method for systematic discovery of adverse drug events from clinical notes.

Wang G, Jung K, Winnenburg R, Shah NH. Wang G, et al. Among authors: winnenburg r. J Am Med Inform Assoc. 2015 Nov;22(6):1196-204. doi: 10.1093/jamia/ocv102. Epub 2015 Jul 31. J Am Med Inform Assoc. 2015. PMID: 26232442 Free PMC article.

6

A time-indexed reference standard of adverse drug reactions.

Harpaz R, Odgers D, Gaskin G, DuMouchel W, Winnenburg R, Bodenreider O, Ripple A, Szarfman A, Sorbello A, Horvitz E, White RW, Shah NH. Harpaz R, et al. Among authors: winnenburg r. Sci Data. 2014 Nov 11;1:140043. doi: 10.1038/sdata.2014.43. Sci Data. 2014. PMID: 25632348 Free PMC article.

7

Feasibility of Prioritizing Drug-Drug-Event Associations Found in Electronic Health Records.

Banda JM, Callahan A, Winnenburg R, Strasberg HR, Cami A, Reis BY, Vilar S, Hripcsak G, Dumontier M, Shah NH. Banda JM, et al. Among authors: winnenburg r. Drug Saf. 2016 Jan;39(1):45-57. doi: 10.1007/s40264-015-0352-2. Drug Saf. 2016. PMID: 26446143 Free PMC article.

8

Toward multimodal signal detection of adverse drug reactions.

Harpaz R, DuMouchel W, Schuemie M, Bodenreider O, Friedman C, Horvitz E, Ripple A, Sorbello A, White RW, Winnenburg R, Shah NH. Harpaz R, et al. Among authors: winnenburg r. J Biomed Inform. 2017 Dec;76:41-49. doi: 10.1016/j.jbi.2017.10.013. Epub 2017 Nov 1. J Biomed Inform. 2017. PMID: 29081385 Free PMC article.

9

Drug repurposing by integrated literature mining and drug-gene-disease triangulation.

Sun P, Guo J, Winnenburg R, Baumbach J. Sun P, et al. Among authors: winnenburg r. Drug Discov Today. 2017 Apr;22(4):615-619. doi: 10.1016/j.drudis.2016.10.008. Epub 2016 Oct 22. Drug Discov Today. 2017. PMID: 27780789

10

Leveraging MEDLINE indexing for pharmacovigilance - Inherent limitations and mitigation strategies.

Winnenburg R, Sorbello A, Ripple A, Harpaz R, Tonning J, Szarfman A, Francis H, Bodenreider O. Winnenburg R, et al. J Biomed Inform. 2015 Oct;57:425-35. doi: 10.1016/j.jbi.2015.08.022. Epub 2015 Sep 2. J Biomed Inform. 2015. PMID: 26342964 Free PMC article.

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