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351 results

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Page 1
A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster.
Zheng Z, Lauritzen JS, Perlman E, Robinson CG, Nichols M, Milkie D, Torrens O, Price J, Fisher CB, Sharifi N, Calle-Schuler SA, Kmecova L, Ali IJ, Karsh B, Trautman ET, Bogovic JA, Hanslovsky P, Jefferis GSXE, Kazhdan M, Khairy K, Saalfeld S, Fetter RD, Bock DD. Zheng Z, et al. Among authors: perlman e. Cell. 2018 Jul 26;174(3):730-743.e22. doi: 10.1016/j.cell.2018.06.019. Epub 2018 Jul 19. Cell. 2018. PMID: 30033368 Free PMC article.
The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience.
Burns R, Roncal WG, Kleissas D, Lillaney K, Manavalan P, Perlman E, Berger DR, Bock DD, Chung K, Grosenick L, Kasthuri N, Weiler NC, Deisseroth K, Kazhdan M, Lichtman J, Reid RC, Smith SJ, Szalay AS, Vogelstein JT, Vogelstein RJ. Burns R, et al. Among authors: perlman e. Sci Stat Database Manag. 2013:10.1145/2484838.2484870. doi: 10.1145/2484838.2484870. Sci Stat Database Manag. 2013. PMID: 24401992 Free PMC article.
A community-developed open-source computational ecosystem for big neuro data.
Vogelstein JT, Perlman E, Falk B, Baden A, Gray Roncal W, Chandrashekhar V, Collman F, Seshamani S, Patsolic JL, Lillaney K, Kazhdan M, Hider R Jr, Pryor D, Matelsky J, Gion T, Manavalan P, Wester B, Chevillet M, Trautman ET, Khairy K, Bridgeford E, Kleissas DM, Tward DJ, Crow AK, Hsueh B, Wright MA, Miller MI, Smith SJ, Vogelstein RJ, Deisseroth K, Burns R. Vogelstein JT, et al. Among authors: perlman e. Nat Methods. 2018 Nov;15(11):846-847. doi: 10.1038/s41592-018-0181-1. Nat Methods. 2018. PMID: 30377345 Free PMC article. No abstract available.
Structured sampling of olfactory input by the fly mushroom body.
Zheng Z, Li F, Fisher C, Ali IJ, Sharifi N, Calle-Schuler S, Hsu J, Masoodpanah N, Kmecova L, Kazimiers T, Perlman E, Nichols M, Li PH, Jain V, Bock DD. Zheng Z, et al. Among authors: perlman e. Curr Biol. 2022 Aug 8;32(15):3334-3349.e6. doi: 10.1016/j.cub.2022.06.031. Epub 2022 Jul 6. Curr Biol. 2022. PMID: 35797998 Free PMC article.
A scalable and modular automated pipeline for stitching of large electron microscopy datasets.
Mahalingam G, Torres R, Kapner D, Trautman ET, Fliss T, Seshamani S, Perlman E, Young R, Kinn S, Buchanan J, Takeno MM, Yin W, Bumbarger DJ, Gwinn RP, Nyhus J, Lein E, Smith SJ, Reid RC, Khairy KA, Saalfeld S, Collman F, Macarico da Costa N. Mahalingam G, et al. Among authors: perlman e. Elife. 2022 Jul 26;11:e76534. doi: 10.7554/eLife.76534. Elife. 2022. PMID: 35880860 Free PMC article.
Whole-brain annotation and multi-connectome cell typing quantifies circuit stereotypy in Drosophila.
Schlegel P, Yin Y, Bates AS, Dorkenwald S, Eichler K, Brooks P, Han DS, Gkantia M, Dos Santos M, Munnelly EJ, Badalamente G, Capdevila LS, Sane VA, Pleijzier MW, Tamimi IFM, Dunne CR, Salgarella I, Javier A, Fang S, Perlman E, Kazimiers T, Jagannathan SR, Matsliah A, Sterling AR, Yu SC, McKellar CE; FlyWire Consortium; Costa M, Seung HS, Murthy M, Hartenstein V, Bock DD, Jefferis GSXE. Schlegel P, et al. Among authors: perlman e. bioRxiv [Preprint]. 2023 Jul 15:2023.06.27.546055. doi: 10.1101/2023.06.27.546055. bioRxiv. 2023. Update in: Nature. 2024 Oct;634(8032):139-152. doi: 10.1038/s41586-024-07686-5 PMID: 37425808 Free PMC article. Updated. Preprint.
Neuronal wiring diagram of an adult brain.
Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, Kuehner K, Ogedengbe O, Morey R, Gager J, Kruk K, Perlman E, Yang R, Deutsch D, Bland D, Sorek M, Lu R, Macrina T, Lee K, Bae JA, Mu S, Nehoran B, Mitchell E, Popovych S, Wu J, Jia Z, Castro M, Kemnitz N, Ih D, Bates AS, Eckstein N, Funke J, Collman F, Bock DD, Jefferis GSXE, Seung HS, Murthy M; FlyWire Consortium. Dorkenwald S, et al. Among authors: perlman e. bioRxiv [Preprint]. 2023 Jul 11:2023.06.27.546656. doi: 10.1101/2023.06.27.546656. bioRxiv. 2023. Update in: Nature. 2024 Oct;634(8032):124-138. doi: 10.1038/s41586-024-07558-y PMID: 37425937 Free PMC article. Updated. Preprint.
Neuronal wiring diagram of an adult brain.
Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, Kuehner K, Ogedengbe O, Morey R, Gager J, Kruk K, Perlman E, Yang R, Deutsch D, Bland D, Sorek M, Lu R, Macrina T, Lee K, Bae JA, Mu S, Nehoran B, Mitchell E, Popovych S, Wu J, Jia Z, Castro MA, Kemnitz N, Ih D, Bates AS, Eckstein N, Funke J, Collman F, Bock DD, Jefferis GSXE, Seung HS, Murthy M; FlyWire Consortium. Dorkenwald S, et al. Among authors: perlman e. Nature. 2024 Oct;634(8032):124-138. doi: 10.1038/s41586-024-07558-y. Epub 2024 Oct 2. Nature. 2024. PMID: 39358518 Free PMC article.
Whole-brain annotation and multi-connectome cell typing of Drosophila.
Schlegel P, Yin Y, Bates AS, Dorkenwald S, Eichler K, Brooks P, Han DS, Gkantia M, Dos Santos M, Munnelly EJ, Badalamente G, Serratosa Capdevila L, Sane VA, Fragniere AMC, Kiassat L, Pleijzier MW, Stürner T, Tamimi IFM, Dunne CR, Salgarella I, Javier A, Fang S, Perlman E, Kazimiers T, Jagannathan SR, Matsliah A, Sterling AR, Yu SC, McKellar CE; FlyWire Consortium; Costa M, Seung HS, Murthy M, Hartenstein V, Bock DD, Jefferis GSXE. Schlegel P, et al. Among authors: perlman e. Nature. 2024 Oct;634(8032):139-152. doi: 10.1038/s41586-024-07686-5. Epub 2024 Oct 2. Nature. 2024. PMID: 39358521 Free PMC article.
To the Cloud! A Grassroots Proposal to Accelerate Brain Science Discovery.
Neuro Cloud Consortium. Electronic address: jovo@jhu.edu; Neuro Cloud Consortium. Neuro Cloud Consortium. Electronic address: jovo@jhu.edu, et al. Neuron. 2016 Nov 2;92(3):622-627. doi: 10.1016/j.neuron.2016.10.033. Neuron. 2016. PMID: 27810005 Free PMC article.
351 results