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HiGlass: web-based visual exploration and analysis of genome interaction maps.
Kerpedjiev P, Abdennur N, Lekschas F, McCallum C, Dinkla K, Strobelt H, Luber JM, Ouellette SB, Azhir A, Kumar N, Hwang J, Lee S, Alver BH, Pfister H, Mirny LA, Park PJ, Gehlenborg N. Kerpedjiev P, et al. Among authors: mirny la. Genome Biol. 2018 Aug 24;19(1):125. doi: 10.1186/s13059-018-1486-1. Genome Biol. 2018. PMID: 30143029 Free PMC article.
Formation of Chromosomal Domains by Loop Extrusion.
Fudenberg G, Imakaev M, Lu C, Goloborodko A, Abdennur N, Mirny LA. Fudenberg G, et al. Among authors: mirny la. Cell Rep. 2016 May 31;15(9):2038-49. doi: 10.1016/j.celrep.2016.04.085. Epub 2016 May 19. Cell Rep. 2016. PMID: 27210764 Free PMC article.
The 4D nucleome project.
Dekker J, Belmont AS, Guttman M, Leshyk VO, Lis JT, Lomvardas S, Mirny LA, O'Shea CC, Park PJ, Ren B, Politz JCR, Shendure J, Zhong S; 4D Nucleome Network. Dekker J, et al. Among authors: mirny la. Nature. 2017 Sep 13;549(7671):219-226. doi: 10.1038/nature23884. Nature. 2017. PMID: 28905911 Free PMC article.
Two independent modes of chromatin organization revealed by cohesin removal.
Schwarzer W, Abdennur N, Goloborodko A, Pekowska A, Fudenberg G, Loe-Mie Y, Fonseca NA, Huber W, Haering CH, Mirny L, Spitz F. Schwarzer W, et al. Nature. 2017 Nov 2;551(7678):51-56. doi: 10.1038/nature24281. Epub 2017 Sep 27. Nature. 2017. PMID: 29094699 Free PMC article.
Emerging Evidence of Chromosome Folding by Loop Extrusion.
Fudenberg G, Abdennur N, Imakaev M, Goloborodko A, Mirny LA. Fudenberg G, et al. Among authors: mirny la. Cold Spring Harb Symp Quant Biol. 2017;82:45-55. doi: 10.1101/sqb.2017.82.034710. Epub 2018 May 4. Cold Spring Harb Symp Quant Biol. 2017. PMID: 29728444 Free PMC article.
Two major mechanisms of chromosome organization.
Mirny LA, Imakaev M, Abdennur N. Mirny LA, et al. Curr Opin Cell Biol. 2019 Jun;58:142-152. doi: 10.1016/j.ceb.2019.05.001. Epub 2019 Jun 20. Curr Opin Cell Biol. 2019. PMID: 31228682 Free PMC article. Review.
134 results