Li G - Search Results

1

HiCDB: a sensitive and robust method for detecting contact domain boundaries.

Chen F, Li G, Zhang MQ, Chen Y. Chen F, et al. Among authors: li g. Nucleic Acids Res. 2018 Nov 30;46(21):11239-11250. doi: 10.1093/nar/gky789. Nucleic Acids Res. 2018. PMID: 30184171 Free PMC article.

2

ModuleRole: a tool for modulization, role determination and visualization in protein-protein interaction networks.

Li G, Li M, Zhang Y, Wang D, Li R, Guimerà R, Gao JT, Zhang MQ. Li G, et al. Among authors: li m, li r. PLoS One. 2014 May 1;9(5):e94608. doi: 10.1371/journal.pone.0094608. eCollection 2014. PLoS One. 2014. PMID: 24788790 Free PMC article.

3

3CPET: finding co-factor complexes from ChIA-PET data using a hierarchical Dirichlet process.

Djekidel MN, Liang Z, Wang Q, Hu Z, Li G, Chen Y, Zhang MQ. Djekidel MN, et al. Among authors: li g. Genome Biol. 2015 Dec 22;16:288. doi: 10.1186/s13059-015-0851-6. Genome Biol. 2015. PMID: 26694485 Free PMC article.

4

ChIA-PET2: a versatile and flexible pipeline for ChIA-PET data analysis.

Li G, Chen Y, Snyder MP, Zhang MQ. Li G, et al. Nucleic Acids Res. 2017 Jan 9;45(1):e4. doi: 10.1093/nar/gkw809. Epub 2016 Sep 12. Nucleic Acids Res. 2017. PMID: 27625391 Free PMC article.

5

BL-Hi-C is an efficient and sensitive approach for capturing structural and regulatory chromatin interactions.

Liang Z, Li G, Wang Z, Djekidel MN, Li Y, Qian MP, Zhang MQ, Chen Y. Liang Z, et al. Among authors: li y, li g. Nat Commun. 2017 Nov 20;8(1):1622. doi: 10.1038/s41467-017-01754-3. Nat Commun. 2017. PMID: 29158486 Free PMC article.

6

Alterations of specific chromatin conformation affect ATRA-induced leukemia cell differentiation.

Li Y, He Y, Liang Z, Wang Y, Chen F, Djekidel MN, Li G, Zhang X, Xiang S, Wang Z, Gao J, Zhang MQ, Chen Y. Li Y, et al. Among authors: li g. Cell Death Dis. 2018 Feb 8;9(2):200. doi: 10.1038/s41419-017-0173-6. Cell Death Dis. 2018. PMID: 29422670 Free PMC article.

7

A novel cytogenetic method to image chromatin interactions at subkilobase resolution: Tn5 transposase-based fluorescence in situ hybridization.

Niu J, Zhang X, Li G, Yan P, Yan Q, Dai Q, Jin D, Shen X, Wang J, Zhang MQ, Gao J. Niu J, et al. Among authors: li g. J Genet Genomics. 2020 Dec 20;47(12):727-735. doi: 10.1016/j.jgg.2020.04.008. Epub 2020 Nov 7. J Genet Genomics. 2020. PMID: 33750643

8

Pan-tissue analysis of allelic alternative polyadenylation suggests widespread functional regulation.

Li Y, Schaefke B, Zou X, Zhang M, Heyd F, Sun W, Zhang B, Li G, Liang W, He Y, Zhou J, Li Y, Fang L, Hu Y, Chen W. Li Y, et al. Among authors: li g. Mol Syst Biol. 2020 Apr;16(4):e9367. doi: 10.15252/msb.20199367. Mol Syst Biol. 2020. PMID: 32311237 Free PMC article.

9

Integrative multi-omics analysis of a colon cancer cell line with heterogeneous Wnt activity revealed RUNX2 as an epigenetic regulator of EMT.

Yi H, Li G, Long Y, Liang W, Cui H, Zhang B, Tan Y, Li Y, Shen L, Deng D, Tang Y, Mao C, Tian S, Cai Y, Zhu Q, Hu Y, Chen W, Fang L. Yi H, et al. Among authors: li y, li g. Oncogene. 2020 Jul;39(28):5152-5164. doi: 10.1038/s41388-020-1351-z. Epub 2020 Jun 13. Oncogene. 2020. PMID: 32535615

10

CASB: a concanavalin A-based sample barcoding strategy for single-cell sequencing.

Fang L, Li G, Sun Z, Zhu Q, Cui H, Li Y, Zhang J, Liang W, Wei W, Hu Y, Chen W. Fang L, et al. Among authors: li y, li g. Mol Syst Biol. 2021 Apr;17(4):e10060. doi: 10.15252/msb.202010060. Mol Syst Biol. 2021. PMID: 33821571 Free PMC article.

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