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Architectural protein subclasses shape 3D organization of genomes during lineage commitment.
Phillips-Cremins JE, Sauria ME, Sanyal A, Gerasimova TI, Lajoie BR, Bell JS, Ong CT, Hookway TA, Guo C, Sun Y, Bland MJ, Wagstaff W, Dalton S, McDevitt TC, Sen R, Dekker J, Taylor J, Corces VG. Phillips-Cremins JE, et al. Among authors: taylor j. Cell. 2013 Jun 6;153(6):1281-95. doi: 10.1016/j.cell.2013.04.053. Epub 2013 May 23. Cell. 2013. PMID: 23706625 Free PMC article.
Measuring the reproducibility and quality of Hi-C data.
Yardımcı GG, Ozadam H, Sauria MEG, Ursu O, Yan KK, Yang T, Chakraborty A, Kaul A, Lajoie BR, Song F, Zhan Y, Ay F, Gerstein M, Kundaje A, Li Q, Taylor J, Yue F, Dekker J, Noble WS. Yardımcı GG, et al. Among authors: taylor j. Genome Biol. 2019 Mar 19;20(1):57. doi: 10.1186/s13059-019-1658-7. Genome Biol. 2019. PMID: 30890172 Free PMC article.
Characterization of Button Loci that Promote Homologous Chromosome Pairing and Cell-Type-Specific Interchromosomal Gene Regulation.
Viets K, Sauria MEG, Chernoff C, Rodriguez Viales R, Echterling M, Anderson C, Tran S, Dove A, Goyal R, Voortman L, Gordus A, Furlong EEM, Taylor J, Johnston RJ Jr. Viets K, et al. Among authors: taylor j. Dev Cell. 2019 Nov 4;51(3):341-356.e7. doi: 10.1016/j.devcel.2019.09.007. Epub 2019 Oct 10. Dev Cell. 2019. PMID: 31607649 Free PMC article.
An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis.
Xiang G, Keller CA, Heuston E, Giardine BM, An L, Wixom AQ, Miller A, Cockburn A, Sauria MEG, Weaver K, Lichtenberg J, Göttgens B, Li Q, Bodine D, Mahony S, Taylor J, Blobel GA, Weiss MJ, Cheng Y, Yue F, Hughes J, Higgs DR, Zhang Y, Hardison RC. Xiang G, et al. Among authors: taylor j. Genome Res. 2020 Mar;30(3):472-484. doi: 10.1101/gr.255760.119. Epub 2020 Mar 4. Genome Res. 2020. PMID: 32132109 Free PMC article.
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes.
Xiang G, He X, Giardine BM, Isaac KJ, Taylor DJ, McCoy RC, Jansen C, Keller CA, Wixom AQ, Cockburn A, Miller A, Qi Q, He Y, Li Y, Lichtenberg J, Heuston EF, Anderson SM, Luan J, Vermunt MW, Yue F, Sauria MEG, Schatz MC, Taylor J, Göttgens B, Hughes JR, Higgs DR, Weiss MJ, Cheng Y, Blobel GA, Bodine DM, Zhang Y, Li Q, Mahony S, Hardison RC. Xiang G, et al. Among authors: taylor dj, taylor j. Genome Res. 2024 Aug 20;34(7):1089-1105. doi: 10.1101/gr.277950.123. Genome Res. 2024. PMID: 38951027 Free PMC article.
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes.
Xiang G, He X, Giardine BM, Isaac KJ, Taylor DJ, McCoy RC, Jansen C, Keller CA, Wixom AQ, Cockburn A, Miller A, Qi Q, He Y, Li Y, Lichtenberg J, Heuston EF, Anderson SM, Luan J, Vermunt MW, Yue F, Sauria MEG, Schatz MC, Taylor J, Gottgens B, Hughes JR, Higgs DR, Weiss MJ, Cheng Y, Blobel GA, Bodine DM, Zhang Y, Li Q, Mahony S, Hardison RC. Xiang G, et al. Among authors: taylor dj, taylor j. bioRxiv [Preprint]. 2024 May 17:2023.04.02.535219. doi: 10.1101/2023.04.02.535219. bioRxiv. 2024. Update in: Genome Res. 2024 Aug 20;34(7):1089-1105. doi: 10.1101/gr.277950.123 PMID: 37066352 Free PMC article. Updated. Preprint.
15,336 results
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