Cordero F - Search Results

1

Reproducible bioinformatics project: a community for reproducible bioinformatics analysis pipelines.

Kulkarni N, Alessandrì L, Panero R, Arigoni M, Olivero M, Ferrero G, Cordero F, Beccuti M, Calogero RA. Kulkarni N, et al. Among authors: cordero f. BMC Bioinformatics. 2018 Oct 15;19(Suppl 10):349. doi: 10.1186/s12859-018-2296-x. BMC Bioinformatics. 2018. PMID: 30367595 Free PMC article.

2

RRE: a tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets.

Lazzarato F, Franceschinis G, Botta M, Cordero F, Calogero RA. Lazzarato F, et al. Among authors: cordero f. Bioinformatics. 2004 Nov 1;20(16):2848-50. doi: 10.1093/bioinformatics/bth287. Epub 2004 Apr 29. Bioinformatics. 2004. PMID: 15117758

3

An integrated approach of immunogenomics and bioinformatics to identify new Tumor Associated Antigens (TAA) for mammary cancer immunological prevention.

Cavallo F, Astolfi A, Iezzi M, Cordero F, Lollini PL, Forni G, Calogero R. Cavallo F, et al. Among authors: cordero f. BMC Bioinformatics. 2005 Dec 1;6 Suppl 4(Suppl 4):S7. doi: 10.1186/1471-2105-6-S4-S7. BMC Bioinformatics. 2005. PMID: 16351756 Free PMC article.

4

Selection of suitable reference genes for accurate normalization of gene expression profile studies in non-small cell lung cancer.

Saviozzi S, Cordero F, Lo Iacono M, Novello S, Scagliotti GV, Calogero RA. Saviozzi S, et al. Among authors: cordero f. BMC Cancer. 2006 Jul 26;6:200. doi: 10.1186/1471-2407-6-200. BMC Cancer. 2006. PMID: 16872493 Free PMC article.

5

Inflammation and breast cancer. Inflammatory component of mammary carcinogenesis in ErbB2 transgenic mice.

Calogero RA, Cordero F, Forni G, Cavallo F. Calogero RA, et al. Among authors: cordero f. Breast Cancer Res. 2007;9(4):211. doi: 10.1186/bcr1745. Breast Cancer Res. 2007. PMID: 17705881 Free PMC article. Review.

6

oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language.

Sanges R, Cordero F, Calogero RA. Sanges R, et al. Among authors: cordero f. Bioinformatics. 2007 Dec 15;23(24):3406-8. doi: 10.1093/bioinformatics/btm469. Epub 2007 Sep 17. Bioinformatics. 2007. PMID: 17875544

7

Microarray data analysis and mining approaches.

Cordero F, Botta M, Calogero RA. Cordero F, et al. Brief Funct Genomic Proteomic. 2007 Dec;6(4):265-81. doi: 10.1093/bfgp/elm034. Epub 2008 Jan 22. Brief Funct Genomic Proteomic. 2007. PMID: 18216026 Free article. Review.

8

Dissecting an alternative splicing analysis workflow for GeneChip Exon 1.0 ST Affymetrix arrays.

Della Beffa C, Cordero F, Calogero RA. Della Beffa C, et al. Among authors: cordero f. BMC Genomics. 2008 Nov 28;9:571. doi: 10.1186/1471-2164-9-571. BMC Genomics. 2008. PMID: 19040723 Free PMC article.

9

Mutant SOD1 and mitochondrial damage alter expression and splicing of genes controlling neuritogenesis in models of neurodegeneration.

Lenzken SC, Romeo V, Zolezzi F, Cordero F, Lamorte G, Bonanno D, Biancolini D, Cozzolino M, Pesaresi MG, Maracchioni A, Sanges R, Achsel T, Carrì MT, Calogero RA, Barabino SM. Lenzken SC, et al. Among authors: cordero f. Hum Mutat. 2011 Feb;32(2):168-82. doi: 10.1002/humu.21394. Epub 2011 Jan 25. Hum Mutat. 2011. PMID: 21120952

10

Optimizing a massive parallel sequencing workflow for quantitative miRNA expression analysis.

Cordero F, Beccuti M, Arigoni M, Donatelli S, Calogero RA. Cordero F, et al. PLoS One. 2012;7(2):e31630. doi: 10.1371/journal.pone.0031630. Epub 2012 Feb 20. PLoS One. 2012. PMID: 22363693 Free PMC article.

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