Quake SR - Search Results

1

Single-nucleotide-resolution sequencing of human N6-methyldeoxyadenosine reveals strand-asymmetric clusters associated with SSBP1 on the mitochondrial genome.

Koh CWQ, Goh YT, Toh JDW, Neo SP, Ng SB, Gunaratne J, Gao YG, Quake SR, Burkholder WF, Goh WSS. Koh CWQ, et al. Among authors: quake sr. Nucleic Acids Res. 2018 Dec 14;46(22):11659-11670. doi: 10.1093/nar/gky1104. Nucleic Acids Res. 2018. PMID: 30412255 Free PMC article.

2

Microfluidic device reads up to four consecutive base pairs in DNA sequencing-by-synthesis.

Kartalov EP, Quake SR. Kartalov EP, et al. Among authors: quake sr. Nucleic Acids Res. 2004 May 20;32(9):2873-9. doi: 10.1093/nar/gkh613. Print 2004. Nucleic Acids Res. 2004. PMID: 15155856 Free PMC article.

3

A microfluidic device for preparing next generation DNA sequencing libraries and for automating other laboratory protocols that require one or more column chromatography steps.

Tan SJ, Phan H, Gerry BM, Kuhn A, Hong LZ, Min Ong Y, Poon PS, Unger MA, Jones RC, Quake SR, Burkholder WF. Tan SJ, et al. Among authors: quake sr. PLoS One. 2013 Jul 24;8(7):e64084. doi: 10.1371/journal.pone.0064084. Print 2013. PLoS One. 2013. PMID: 23894273 Free PMC article.

4

Single-cell DNA-methylation analysis reveals epigenetic chimerism in preimplantation embryos.

Lorthongpanich C, Cheow LF, Balu S, Quake SR, Knowles BB, Burkholder WF, Solter D, Messerschmidt DM. Lorthongpanich C, et al. Among authors: quake sr. Science. 2013 Sep 6;341(6150):1110-2. doi: 10.1126/science.1240617. Science. 2013. PMID: 24009393

5

Linkage disequilibrium and signatures of positive selection around LINE-1 retrotransposons in the human genome.

Kuhn A, Ong YM, Cheng CY, Wong TY, Quake SR, Burkholder WF. Kuhn A, et al. Among authors: quake sr. Proc Natl Acad Sci U S A. 2014 Jun 3;111(22):8131-6. doi: 10.1073/pnas.1401532111. Epub 2014 May 20. Proc Natl Acad Sci U S A. 2014. PMID: 24847061 Free PMC article.

6

Multiplexed analysis of protein-ligand interactions by fluorescence anisotropy in a microfluidic platform.

Cheow LF, Viswanathan R, Chin CS, Jennifer N, Jones RC, Guccione E, Quake SR, Burkholder WF. Cheow LF, et al. Among authors: quake sr. Anal Chem. 2014 Oct 7;86(19):9901-8. doi: 10.1021/ac502605f. Epub 2014 Sep 25. Anal Chem. 2014. PMID: 25207435

7

Multiplexed locus-specific analysis of DNA methylation in single cells.

Cheow LF, Quake SR, Burkholder WF, Messerschmidt DM. Cheow LF, et al. Among authors: quake sr. Nat Protoc. 2015 Apr;10(4):619-31. doi: 10.1038/nprot.2015.041. Epub 2015 Mar 26. Nat Protoc. 2015. PMID: 25811896

8

Read count-based method for high-throughput allelic genotyping of transposable elements and structural variants.

Kuhn A, Ong YM, Quake SR, Burkholder WF. Kuhn A, et al. Among authors: quake sr. BMC Genomics. 2015 Jul 8;16(1):508. doi: 10.1186/s12864-015-1700-4. BMC Genomics. 2015. PMID: 26153459 Free PMC article.

9

Single-cell multimodal profiling reveals cellular epigenetic heterogeneity.

Cheow LF, Courtois ET, Tan Y, Viswanathan R, Xing Q, Tan RZ, Tan DS, Robson P, Loh YH, Quake SR, Burkholder WF. Cheow LF, et al. Among authors: quake sr. Nat Methods. 2016 Oct;13(10):833-6. doi: 10.1038/nmeth.3961. Epub 2016 Aug 15. Nat Methods. 2016. PMID: 27525975

10

Single Cell Restriction Enzyme-Based Analysis of Methylation at Genomic Imprinted Regions in Preimplantation Mouse Embryos.

Ling KY, Cheow LF, Quake SR, Burkholder WF, Messerschmidt DM. Ling KY, et al. Among authors: quake sr. Methods Mol Biol. 2017;1605:171-189. doi: 10.1007/978-1-4939-6988-3_12. Methods Mol Biol. 2017. PMID: 28456965

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