Plewczynski D - Search Results

1

Author Correction: Quantitative 3-D morphometric analysis of individual dendritic spines.

Basu S, Saha PK, Roszkowska M, Magnowska M, Baczynska E, Das N, Plewczynski D, Wlodarczyk J. Basu S, et al. Among authors: plewczynski d. Sci Rep. 2018 Nov 15;8(1):17142. doi: 10.1038/s41598-018-35164-2. Sci Rep. 2018. PMID: 30442964 Free PMC article.

2

Hematopoietic stem cells undergo a lymphoid to myeloid switch in early stages of emergency granulopoiesis.

Vanickova K, Milosevic M, Ribeiro Bas I, Burocziova M, Yokota A, Danek P, Grusanovic S, Chiliński M, Plewczynski D, Rohlena J, Hirai H, Rohlenova K, Alberich-Jorda M. Vanickova K, et al. Among authors: plewczynski d. EMBO J. 2023 Dec 1;42(23):e113527. doi: 10.15252/embj.2023113527. Epub 2023 Oct 17. EMBO J. 2023. PMID: 37846891 Free PMC article.

3

Identification of Human miRNA Biomarkers Targeting the SARS-CoV-2 Genome.

Saha I, Ghosh N, Plewczynski D. Saha I, et al. Among authors: plewczynski d. ACS Omega. 2022 Dec 5;7(50):46411-46420. doi: 10.1021/acsomega.2c05091. eCollection 2022 Dec 20. ACS Omega. 2022. PMID: 36570256 Free PMC article.

4

Current challenges in understanding the role of enhancers in disease.

Zaugg JB, Sahlén P, Andersson R, Alberich-Jorda M, de Laat W, Deplancke B, Ferrer J, Mandrup S, Natoli G, Plewczynski D, Rada-Iglesias A, Spicuglia S. Zaugg JB, et al. Among authors: plewczynski d. Nat Struct Mol Biol. 2022 Dec;29(12):1148-1158. doi: 10.1038/s41594-022-00896-3. Epub 2022 Dec 8. Nat Struct Mol Biol. 2022. PMID: 36482255 Review.

5

AMS 3.0: prediction of post-translational modifications.

Basu S, Plewczynski D. Basu S, et al. Among authors: plewczynski d. BMC Bioinformatics. 2010 Apr 28;11:210. doi: 10.1186/1471-2105-11-210. BMC Bioinformatics. 2010. PMID: 20423529 Free PMC article.

6

PPI_SVM: prediction of protein-protein interactions using machine learning, domain-domain affinities and frequency tables.

Chatterjee P, Basu S, Kundu M, Nasipuri M, Plewczynski D. Chatterjee P, et al. Among authors: plewczynski d. Cell Mol Biol Lett. 2011 Jun;16(2):264-78. doi: 10.2478/s11658-011-0008-x. Epub 2011 Mar 20. Cell Mol Biol Lett. 2011. PMID: 21442443 Free PMC article.

7

PSP_MCSVM: brainstorming consensus prediction of protein secondary structures using two-stage multiclass support vector machines.

Chatterjee P, Basu S, Kundu M, Nasipuri M, Plewczynski D. Chatterjee P, et al. Among authors: plewczynski d. J Mol Model. 2011 Sep;17(9):2191-201. doi: 10.1007/s00894-011-1102-8. Epub 2011 May 19. J Mol Model. 2011. PMID: 21594694 Free PMC article.

8

AMS 4.0: consensus prediction of post-translational modifications in protein sequences.

Plewczynski D, Basu S, Saha I. Plewczynski D, et al. Amino Acids. 2012 Aug;43(2):573-82. doi: 10.1007/s00726-012-1290-2. Epub 2012 May 4. Amino Acids. 2012. PMID: 22555647 Free PMC article.

9

PPIcons: identification of protein-protein interaction sites in selected organisms.

Sriwastava BK, Basu S, Maulik U, Plewczynski D. Sriwastava BK, et al. Among authors: plewczynski d. J Mol Model. 2013 Sep;19(9):4059-70. doi: 10.1007/s00894-013-1886-9. Epub 2013 Jun 2. J Mol Model. 2013. PMID: 23729008 Free PMC article.

10

Multi-level machine learning prediction of protein-protein interactions in Saccharomyces cerevisiae.

Zubek J, Tatjewski M, Boniecki A, Mnich M, Basu S, Plewczynski D. Zubek J, et al. Among authors: plewczynski d. PeerJ. 2015 Jul 2;3:e1041. doi: 10.7717/peerj.1041. eCollection 2015. PeerJ. 2015. PMID: 26157620 Free PMC article.

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