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Transcriptome Deconvolution of Heterogeneous Tumor Samples with Immune Infiltration.
Wang Z, Cao S, Morris JS, Ahn J, Liu R, Tyekucheva S, Gao F, Li B, Lu W, Tang X, Wistuba II, Bowden M, Mucci L, Loda M, Parmigiani G, Holmes CC, Wang W. Wang Z, et al. Among authors: parmigiani g. iScience. 2018 Nov 30;9:451-460. doi: 10.1016/j.isci.2018.10.028. Epub 2018 Nov 2. iScience. 2018. PMID: 30469014 Free PMC article.
Integrating diverse genomic data using gene sets.
Tyekucheva S, Marchionni L, Karchin R, Parmigiani G. Tyekucheva S, et al. Among authors: parmigiani g. Genome Biol. 2011 Oct 21;12(10):R105. doi: 10.1186/gb-2011-12-10-r105. Genome Biol. 2011. PMID: 22018358 Free PMC article.
curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome.
Ganzfried BF, Riester M, Haibe-Kains B, Risch T, Tyekucheva S, Jazic I, Wang XV, Ahmadifar M, Birrer MJ, Parmigiani G, Huttenhower C, Waldron L. Ganzfried BF, et al. Among authors: parmigiani g. Database (Oxford). 2013 Apr 2;2013:bat013. doi: 10.1093/database/bat013. Print 2013. Database (Oxford). 2013. PMID: 23550061 Free PMC article.
Comparative meta-analysis of prognostic gene signatures for late-stage ovarian cancer.
Waldron L, Haibe-Kains B, Culhane AC, Riester M, Ding J, Wang XV, Ahmadifar M, Tyekucheva S, Bernau C, Risch T, Ganzfried BF, Huttenhower C, Birrer M, Parmigiani G. Waldron L, et al. Among authors: parmigiani g. J Natl Cancer Inst. 2014 Apr 3;106(5):dju049. doi: 10.1093/jnci/dju049. J Natl Cancer Inst. 2014. PMID: 24700801 Free PMC article. Review.
Stromal and epithelial transcriptional map of initiation progression and metastatic potential of human prostate cancer.
Tyekucheva S, Bowden M, Bango C, Giunchi F, Huang Y, Zhou C, Bondi A, Lis R, Van Hemelrijck M, Andrén O, Andersson SO, Watson RW, Pennington S, Finn SP, Martin NE, Stampfer MJ, Parmigiani G, Penney KL, Fiorentino M, Mucci LA, Loda M. Tyekucheva S, et al. Among authors: parmigiani g. Nat Commun. 2017 Sep 4;8(1):420. doi: 10.1038/s41467-017-00460-4. Nat Commun. 2017. PMID: 28871082 Free PMC article.
Precision Prevention and Early Detection of Cancer: Fundamental Principles.
Rebbeck TR, Burns-White K, Chan AT, Emmons K, Freedman M, Hunter DJ, Kraft P, Laden F, Mucci L, Parmigiani G, Schrag D, Syngal S, Tamimi RM, Viswanath K, Yurgelun MB, Garber JE. Rebbeck TR, et al. Among authors: parmigiani g. Cancer Discov. 2018 Jul;8(7):803-811. doi: 10.1158/2159-8290.CD-17-1415. Epub 2018 Jun 15. Cancer Discov. 2018. PMID: 29907587 Review.
293 results