Zhang L - Search Results

1

vi-HMM: a novel HMM-based method for sequence variant identification in short-read data.

Tang M, Hasan MS, Zhu H, Zhang L, Wu X. Tang M, et al. Among authors: zhang l. Hum Genomics. 2019 Feb 13;13(1):9. doi: 10.1186/s40246-019-0194-6. Hum Genomics. 2019. PMID: 30795817 Free PMC article.

2

Quantitative prediction of the effect of genetic variation using hidden Markov models.

Liu M, Watson LT, Zhang L. Liu M, et al. Among authors: zhang l. BMC Bioinformatics. 2014 Jan 9;15:5. doi: 10.1186/1471-2105-15-5. BMC Bioinformatics. 2014. PMID: 24405700 Free PMC article.

3

Vindel: a simple pipeline for checking indel redundancy.

Li Z, Wu X, He B, Zhang L. Li Z, et al. Among authors: zhang l. BMC Bioinformatics. 2014 Nov 19;15(1):359. doi: 10.1186/s12859-014-0359-1. BMC Bioinformatics. 2014. PMID: 25407965 Free PMC article.

4

Predicting the combined effect of multiple genetic variants.

Liu M, Watson LT, Zhang L. Liu M, et al. Among authors: zhang l. Hum Genomics. 2015 Jul 30;9(1):18. doi: 10.1186/s40246-015-0040-4. Hum Genomics. 2015. PMID: 26223264 Free PMC article.

5

Performance evaluation of indel calling tools using real short-read data.

Hasan MS, Wu X, Zhang L. Hasan MS, et al. Among authors: zhang l. Hum Genomics. 2015 Aug 19;9(1):20. doi: 10.1186/s40246-015-0042-2. Hum Genomics. 2015. PMID: 26286629 Free PMC article.

6

A Bayesian Assignment Method for Ambiguous Bisulfite Short Reads.

Tran H, Wu X, Tithi S, Sun MA, Xie H, Zhang L. Tran H, et al. Among authors: zhang l. PLoS One. 2016 Mar 24;11(3):e0151826. doi: 10.1371/journal.pone.0151826. eCollection 2016. PLoS One. 2016. PMID: 27011215 Free PMC article.

7

SPAI: an interactive platform for indel analysis.

Hasan MS, Zhang L. Hasan MS, et al. Among authors: zhang l. BMC Genomics. 2016 Aug 31;17 Suppl 5(Suppl 5):496. doi: 10.1186/s12864-016-2824-x. BMC Genomics. 2016. PMID: 27585593 Free PMC article.

8

UPS-indel: a Universal Positioning System for Indels.

Hasan MS, Wu X, Watson LT, Zhang L. Hasan MS, et al. Among authors: zhang l. Sci Rep. 2017 Oct 26;7(1):14106. doi: 10.1038/s41598-017-14400-1. Sci Rep. 2017. PMID: 29074871 Free PMC article.

9

Identification of Differentially Methylated Sites with Weak Methylation Effects.

Tran H, Zhu H, Wu X, Kim G, Clarke CR, Larose H, Haak DC, Askew SD, Barney JN, Westwood JH, Zhang L. Tran H, et al. Among authors: zhang l. Genes (Basel). 2018 Feb 8;9(2):75. doi: 10.3390/genes9020075. Genes (Basel). 2018. PMID: 29419727 Free PMC article.

10

Improving somatic variant identification through integration of genome and exome data.

Vijayan V, Yiu SM, Zhang L. Vijayan V, et al. Among authors: zhang l. BMC Genomics. 2017 Oct 16;18(Suppl 7):748. doi: 10.1186/s12864-017-4134-3. BMC Genomics. 2017. PMID: 29513195 Free PMC article.

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