Xiao X - Search Results

1

Allele-specific binding of RNA-binding proteins reveals functional genetic variants in the RNA.

Yang EW, Bahn JH, Hsiao EY, Tan BX, Sun Y, Fu T, Zhou B, Van Nostrand EL, Pratt GA, Freese P, Wei X, Quinones-Valdez G, Urban AE, Graveley BR, Burge CB, Yeo GW, Xiao X. Yang EW, et al. Among authors: xiao x. Nat Commun. 2019 Mar 22;10(1):1338. doi: 10.1038/s41467-019-09292-w. Nat Commun. 2019. PMID: 30902979 Free PMC article.

2

General and specific functions of exonic splicing silencers in splicing control.

Wang Z, Xiao X, Van Nostrand E, Burge CB. Wang Z, et al. Among authors: xiao x. Mol Cell. 2006 Jul 7;23(1):61-70. doi: 10.1016/j.molcel.2006.05.018. Epub 2006 Jun 22. Mol Cell. 2006. PMID: 16797197 Free PMC article.

3

Inference of splicing regulatory activities by sequence neighborhood analysis.

Stadler MB, Shomron N, Yeo GW, Schneider A, Xiao X, Burge CB. Stadler MB, et al. Among authors: xiao x. PLoS Genet. 2006 Nov 24;2(11):e191. doi: 10.1371/journal.pgen.0020191. Epub 2006 Sep 28. PLoS Genet. 2006. PMID: 17121466 Free PMC article.

4

Coevolutionary networks of splicing cis-regulatory elements.

Xiao X, Wang Z, Jang M, Burge CB. Xiao X, et al. Proc Natl Acad Sci U S A. 2007 Nov 20;104(47):18583-8. doi: 10.1073/pnas.0707349104. Epub 2007 Nov 12. Proc Natl Acad Sci U S A. 2007. PMID: 17998536 Free PMC article.

5

A postnatal switch of CELF and MBNL proteins reprograms alternative splicing in the developing heart.

Kalsotra A, Xiao X, Ward AJ, Castle JC, Johnson JM, Burge CB, Cooper TA. Kalsotra A, et al. Among authors: xiao x. Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20333-8. doi: 10.1073/pnas.0809045105. Epub 2008 Dec 15. Proc Natl Acad Sci U S A. 2008. PMID: 19075228 Free PMC article.

6

Splice site strength-dependent activity and genetic buffering by poly-G runs.

Xiao X, Wang Z, Jang M, Nutiu R, Wang ET, Burge CB. Xiao X, et al. Nat Struct Mol Biol. 2009 Oct;16(10):1094-100. doi: 10.1038/nsmb.1661. Epub 2009 Sep 13. Nat Struct Mol Biol. 2009. PMID: 19749754 Free PMC article.

7

Accurate identification of A-to-I RNA editing in human by transcriptome sequencing.

Bahn JH, Lee JH, Li G, Greer C, Peng G, Xiao X. Bahn JH, et al. Among authors: xiao x. Genome Res. 2012 Jan;22(1):142-50. doi: 10.1101/gr.124107.111. Epub 2011 Sep 29. Genome Res. 2012. PMID: 21960545 Free PMC article.

8

The cardiotonic steroid digitoxin regulates alternative splicing through depletion of the splicing factors SRSF3 and TRA2B.

Anderson ES, Lin CH, Xiao X, Stoilov P, Burge CB, Black DL. Anderson ES, et al. Among authors: xiao x. RNA. 2012 May;18(5):1041-9. doi: 10.1261/rna.032912.112. Epub 2012 Mar 28. RNA. 2012. PMID: 22456266 Free PMC article.

9

Identification of allele-specific alternative mRNA processing via transcriptome sequencing.

Li G, Bahn JH, Lee JH, Peng G, Chen Z, Nelson SF, Xiao X. Li G, et al. Among authors: xiao x. Nucleic Acids Res. 2012 Jul;40(13):e104. doi: 10.1093/nar/gks280. Epub 2012 Mar 29. Nucleic Acids Res. 2012. PMID: 22467206 Free PMC article.

10

A complex network of factors with overlapping affinities represses splicing through intronic elements.

Wang Y, Xiao X, Zhang J, Choudhury R, Robertson A, Li K, Ma M, Burge CB, Wang Z. Wang Y, et al. Among authors: xiao x. Nat Struct Mol Biol. 2013 Jan;20(1):36-45. doi: 10.1038/nsmb.2459. Epub 2012 Dec 16. Nat Struct Mol Biol. 2013. PMID: 23241926 Free PMC article.

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