Liu XQ - Search Results

1

Prediction of Long Non-Coding RNAs Based on Deep Learning.

Liu XQ, Li BX, Zeng GR, Liu QY, Ai DM. Liu XQ, et al. Among authors: liu qy. Genes (Basel). 2019 Apr 3;10(4):273. doi: 10.3390/genes10040273. Genes (Basel). 2019. PMID: 30987229 Free PMC article.

2

Deep learning improves the ability of sgRNA off-target propensity prediction.

Liu Q, Cheng X, Liu G, Li B, Liu X. Liu Q, et al. BMC Bioinformatics. 2020 Feb 10;21(1):51. doi: 10.1186/s12859-020-3395-z. BMC Bioinformatics. 2020. PMID: 32041517 Free PMC article.

3

CNN-XG: A Hybrid Framework for sgRNA On-Target Prediction.

Li B, Ai D, Liu X. Li B, et al. Biomolecules. 2022 Mar 7;12(3):409. doi: 10.3390/biom12030409. Biomolecules. 2022. PMID: 35327601 Free PMC article.

4

Joint Analysis of Microbial and Immune Cell Abundance in Liver Cancer Tissue Using a Gene Expression Profile Deconvolution Algorithm Combined With Foreign Read Remapping.

Ai D, Xing Y, Zhang Q, Wang Y, Liu X, Liu G, Xia LC. Ai D, et al. Front Immunol. 2022 Apr 14;13:853213. doi: 10.3389/fimmu.2022.853213. eCollection 2022. Front Immunol. 2022. PMID: 35493464 Free PMC article.

5

Predicting CRISPR/Cas9 Repair Outcomes by Attention-Based Deep Learning Framework.

Liu X, Wang S, Ai D. Liu X, et al. Cells. 2022 Jun 5;11(11):1847. doi: 10.3390/cells11111847. Cells. 2022. PMID: 35681543 Free PMC article.

6

Regularized survival learning and cross-database analysis enabled identification of colorectal cancer prognosis-related immune genes.

Ai D, Wang M, Zhang Q, Cheng L, Wang Y, Liu X, Xia LC. Ai D, et al. Front Genet. 2023 Feb 23;14:1148470. doi: 10.3389/fgene.2023.1148470. eCollection 2023. Front Genet. 2023. PMID: 36911403 Free PMC article.

7

Tumor tissue microorganisms are closely associated with tumor immune subtypes.

Ai D, Zhang X, Zhang Q, Li X, Wang Y, Liu X, Xia LC. Ai D, et al. Comput Biol Med. 2023 May;157:106774. doi: 10.1016/j.compbiomed.2023.106774. Epub 2023 Mar 11. Comput Biol Med. 2023. PMID: 36931204

8

piRNA identification based on motif discovery.

Liu X, Ding J, Gong F. Liu X, et al. Mol Biosyst. 2014 Dec;10(12):3075-80. doi: 10.1039/c4mb00447g. Mol Biosyst. 2014. PMID: 25230731

9

Integrated sequence-structure motifs suffice to identify microRNA precursors.

Liu X, He S, Skogerbø G, Gong F, Chen R. Liu X, et al. PLoS One. 2012;7(3):e32797. doi: 10.1371/journal.pone.0032797. Epub 2012 Mar 15. PLoS One. 2012. PMID: 22438883 Free PMC article.

10

Multi-scale analysis of schizophrenia risk genes, brain structure, and clinical symptoms reveals integrative clues for subtyping schizophrenia patients.

Ma L, Rolls ET, Liu X, Liu Y, Jiao Z, Wang Y, Gong W, Ma Z, Gong F, Wan L. Ma L, et al. J Mol Cell Biol. 2019 Aug 19;11(8):678-687. doi: 10.1093/jmcb/mjy071. J Mol Cell Biol. 2019. PMID: 30508120 Free PMC article.

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