Kucukural A - Search Results

1

CRISPR-SONIC: targeted somatic oncogene knock-in enables rapid in vivo cancer modeling.

Mou H, Ozata DM, Smith JL, Sheel A, Kwan SY, Hough S, Kucukural A, Kennedy Z, Cao Y, Xue W. Mou H, et al. Among authors: kucukural a. Genome Med. 2019 Apr 16;11(1):21. doi: 10.1186/s13073-019-0627-9. Genome Med. 2019. PMID: 30987660 Free PMC article.

2

DEBrowser: interactive differential expression analysis and visualization tool for count data.

Kucukural A, Yukselen O, Ozata DM, Moore MJ, Garber M. Kucukural A, et al. BMC Genomics. 2019 Jan 5;20(1):6. doi: 10.1186/s12864-018-5362-x. BMC Genomics. 2019. PMID: 30611200 Free PMC article.

3

Evolutionarily conserved pachytene piRNA loci are highly divergent among modern humans.

Özata DM, Yu T, Mou H, Gainetdinov I, Colpan C, Cecchini K, Kaymaz Y, Wu PH, Fan K, Kucukural A, Weng Z, Zamore PD. Özata DM, et al. Among authors: kucukural a. Nat Ecol Evol. 2020 Jan;4(1):156-168. doi: 10.1038/s41559-019-1065-1. Epub 2019 Dec 23. Nat Ecol Evol. 2020. PMID: 31900453 Free PMC article.

4

Dietary suppression of MHC class II expression in intestinal epithelial cells enhances intestinal tumorigenesis.

Beyaz S, Chung C, Mou H, Bauer-Rowe KE, Xifaras ME, Ergin I, Dohnalova L, Biton M, Shekhar K, Eskiocak O, Papciak K, Ozler K, Almeqdadi M, Yueh B, Fein M, Annamalai D, Valle-Encinas E, Erdemir A, Dogum K, Shah V, Alici-Garipcan A, Meyer HV, Özata DM, Elinav E, Kucukural A, Kumar P, McAleer JP, Fox JG, Thaiss CA, Regev A, Roper J, Orkin SH, Yilmaz ÖH. Beyaz S, et al. Among authors: kucukural a. Cell Stem Cell. 2021 Nov 4;28(11):1922-1935.e5. doi: 10.1016/j.stem.2021.08.007. Epub 2021 Sep 15. Cell Stem Cell. 2021. PMID: 34529935 Free PMC article.

5

GUIDEseq: a bioconductor package to analyze GUIDE-Seq datasets for CRISPR-Cas nucleases.

Zhu LJ, Lawrence M, Gupta A, Pagès H, Kucukural A, Garber M, Wolfe SA. Zhu LJ, et al. Among authors: kucukural a. BMC Genomics. 2017 May 15;18(1):379. doi: 10.1186/s12864-017-3746-y. BMC Genomics. 2017. PMID: 28506212 Free PMC article.

6

Genomic Characterization of Endothelial Enhancers Reveals a Multifunctional Role for NR2F2 in Regulation of Arteriovenous Gene Expression.

Sissaoui S, Yu J, Yan A, Li R, Yukselen O, Kucukural A, Zhu LJ, Lawson ND. Sissaoui S, et al. Among authors: kucukural a. Circ Res. 2020 Mar 27;126(7):875-888. doi: 10.1161/CIRCRESAHA.119.316075. Epub 2020 Feb 17. Circ Res. 2020. PMID: 32065070 Free PMC article.

7

Reduced Neurog3 Gene Dosage Shifts Enteroendocrine Progenitor Towards Goblet Cell Lineage in the Mouse Intestine.

Li HJ, Ray SK, Kucukural A, Gradwohl G, Leiter AB. Li HJ, et al. Among authors: kucukural a. Cell Mol Gastroenterol Hepatol. 2021;11(2):433-448. doi: 10.1016/j.jcmgh.2020.08.006. Epub 2020 Aug 18. Cell Mol Gastroenterol Hepatol. 2021. PMID: 32822913 Free PMC article.

8

The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus.

Singh G, Kucukural A, Cenik C, Leszyk JD, Shaffer SA, Weng Z, Moore MJ. Singh G, et al. Among authors: kucukural a. Cell. 2012 Nov 9;151(4):750-764. doi: 10.1016/j.cell.2012.10.007. Epub 2012 Oct 18. Cell. 2012. PMID: 23084401 Free PMC article.

9

Staufen1 senses overall transcript secondary structure to regulate translation.

Ricci EP, Kucukural A, Cenik C, Mercier BC, Singh G, Heyer EE, Ashar-Patel A, Peng L, Moore MJ. Ricci EP, et al. Among authors: kucukural a. Nat Struct Mol Biol. 2014 Jan;21(1):26-35. doi: 10.1038/nsmb.2739. Epub 2013 Dec 15. Nat Struct Mol Biol. 2014. PMID: 24336223 Free PMC article.

10

AAV-delivered suppressor tRNA overcomes a nonsense mutation in mice.

Wang J, Zhang Y, Mendonca CA, Yukselen O, Muneeruddin K, Ren L, Liang J, Zhou C, Xie J, Li J, Jiang Z, Kucukural A, Shaffer SA, Gao G, Wang D. Wang J, et al. Among authors: kucukural a. Nature. 2022 Apr;604(7905):343-348. doi: 10.1038/s41586-022-04533-3. Epub 2022 Mar 23. Nature. 2022. PMID: 35322228 Free PMC article.

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