Kuraku S - Search Results

1

Evaluating Genome Assemblies and Gene Models Using gVolante.

Nishimura O, Hara Y, Kuraku S. Nishimura O, et al. Among authors: kuraku s. Methods Mol Biol. 2019;1962:247-256. doi: 10.1007/978-1-4939-9173-0_15. Methods Mol Biol. 2019. PMID: 31020565

2

A vertebrate-wide catalogue of T1R receptors reveals diversity in taste perception.

Nishihara H, Toda Y, Kuramoto T, Kamohara K, Goto A, Hoshino K, Okada S, Kuraku S, Okabe M, Ishimaru Y. Nishihara H, et al. Among authors: kuraku s. Nat Ecol Evol. 2024 Jan;8(1):111-120. doi: 10.1038/s41559-023-02258-8. Epub 2023 Dec 13. Nat Ecol Evol. 2024. PMID: 38093021 Free PMC article.

3

Detection and phylogenetic assessment of conserved synteny derived from whole genome duplications.

Kuraku S, Meyer A. Kuraku S, et al. Methods Mol Biol. 2012;855:385-95. doi: 10.1007/978-1-61779-582-4_14. Methods Mol Biol. 2012. PMID: 22407717 Review.

4

Intra-genomic GC heterogeneity in sauropsids: evolutionary insights from cDNA mapping and GC(3) profiling in snake.

Matsubara K, Kuraku S, Tarui H, Nishimura O, Nishida C, Agata K, Kumazawa Y, Matsuda Y. Matsubara K, et al. Among authors: kuraku s. BMC Genomics. 2012 Nov 9;13:604. doi: 10.1186/1471-2164-13-604. BMC Genomics. 2012. PMID: 23140509 Free PMC article.

5

aLeaves facilitates on-demand exploration of metazoan gene family trees on MAFFT sequence alignment server with enhanced interactivity.

Kuraku S, Zmasek CM, Nishimura O, Katoh K. Kuraku S, et al. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W22-8. doi: 10.1093/nar/gkt389. Epub 2013 May 15. Nucleic Acids Res. 2013. PMID: 23677614 Free PMC article.

6

Optimization and cost-saving in tagmentation-based mate-pair library preparation and sequencing.

Tatsumi K, Nishimura O, Itomi K, Tanegashima C, Kuraku S. Tatsumi K, et al. Among authors: kuraku s. Biotechniques. 2015 May 1;58(5):253-7. doi: 10.2144/000114288. eCollection 2015 May. Biotechniques. 2015. PMID: 25967904 Free article.

7

Diversification of non-visual photopigment parapinopsin in spectral sensitivity for diverse pineal functions.

Koyanagi M, Wada S, Kawano-Yamashita E, Hara Y, Kuraku S, Kosaka S, Kawakami K, Tamotsu S, Tsukamoto H, Shichida Y, Terakita A. Koyanagi M, et al. Among authors: kuraku s. BMC Biol. 2015 Sep 15;13:73. doi: 10.1186/s12915-015-0174-9. BMC Biol. 2015. PMID: 26370232 Free PMC article.

8

Optimizing and benchmarking de novo transcriptome sequencing: from library preparation to assembly evaluation.

Hara Y, Tatsumi K, Yoshida M, Kajikawa E, Kiyonari H, Kuraku S. Hara Y, et al. Among authors: kuraku s. BMC Genomics. 2015 Nov 18;16:977. doi: 10.1186/s12864-015-2007-1. BMC Genomics. 2015. PMID: 26581708 Free PMC article.

9

Mammalian Reverse Genetics without Crossing Reveals Nr3a as a Short-Sleeper Gene.

Sunagawa GA, Sumiyama K, Ukai-Tadenuma M, Perrin D, Fujishima H, Ukai H, Nishimura O, Shi S, Ohno RI, Narumi R, Shimizu Y, Tone D, Ode KL, Kuraku S, Ueda HR. Sunagawa GA, et al. Among authors: kuraku s. Cell Rep. 2016 Jan 26;14(3):662-677. doi: 10.1016/j.celrep.2015.12.052. Epub 2016 Jan 7. Cell Rep. 2016. PMID: 26774482 Free article.

10

Incorporating tree-thinking and evolutionary time scale into developmental biology.

Kuraku S, Feiner N, Keeley SD, Hara Y. Kuraku S, et al. Dev Growth Differ. 2016 Jan;58(1):131-42. doi: 10.1111/dgd.12258. Epub 2016 Jan 5. Dev Growth Differ. 2016. PMID: 26818824 Review.

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