Bagger FO - Search Results

1

Deconvolution of autoencoders to learn biological regulatory modules from single cell mRNA sequencing data.

Kinalis S, Nielsen FC, Winther O, Bagger FO. Kinalis S, et al. Among authors: bagger fo. BMC Bioinformatics. 2019 Jul 8;20(1):379. doi: 10.1186/s12859-019-2952-9. BMC Bioinformatics. 2019. PMID: 31286861 Free PMC article.

2

HemaExplorer: a Web server for easy and fast visualization of gene expression in normal and malignant hematopoiesis.

Bagger FO, Rapin N, Theilgaard-Mönch K, Kaczkowski B, Jendholm J, Winther O, Porse B. Bagger FO, et al. Blood. 2012 Jun 28;119(26):6394-5. doi: 10.1182/blood-2012-05-427310. Blood. 2012. PMID: 22745298 Free article. No abstract available.

3

HemaExplorer: a database of mRNA expression profiles in normal and malignant haematopoiesis.

Bagger FO, Rapin N, Theilgaard-Mönch K, Kaczkowski B, Thoren LA, Jendholm J, Winther O, Porse BT. Bagger FO, et al. Nucleic Acids Res. 2013 Jan;41(Database issue):D1034-9. doi: 10.1093/nar/gks1021. Epub 2012 Nov 9. Nucleic Acids Res. 2013. PMID: 23143109 Free PMC article.

4

Comparing cancer vs normal gene expression profiles identifies new disease entities and common transcriptional programs in AML patients.

Rapin N, Bagger FO, Jendholm J, Mora-Jensen H, Krogh A, Kohlmann A, Thiede C, Borregaard N, Bullinger L, Winther O, Theilgaard-Mönch K, Porse BT. Rapin N, et al. Among authors: bagger fo. Blood. 2014 Feb 6;123(6):894-904. doi: 10.1182/blood-2013-02-485771. Epub 2013 Dec 20. Blood. 2014. PMID: 24363398 Free article.

5

Cellular origin of prognostic chromosomal aberrations in AML patients.

Mora-Jensen H, Jendholm J, Rapin N, Andersen MK, Roug AS, Bagger FO, Bullinger L, Winther O, Borregaard N, Porse BT, Theilgaard-Mönch K. Mora-Jensen H, et al. Among authors: bagger fo. Leukemia. 2015 Aug;29(8):1785-9. doi: 10.1038/leu.2015.30. Epub 2015 Feb 11. Leukemia. 2015. PMID: 25670329 No abstract available.

6

BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis.

Bagger FO, Sasivarevic D, Sohi SH, Laursen LG, Pundhir S, Sønderby CK, Winther O, Rapin N, Porse BT. Bagger FO, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D917-24. doi: 10.1093/nar/gkv1101. Epub 2015 Oct 26. Nucleic Acids Res. 2016. PMID: 26507857 Free PMC article.

7

A computational method for identification of vaccine targets from protein regions of conserved human leukocyte antigen binding.

Olsen LR, Simon C, Kudahl UJ, Bagger FO, Winther O, Reinherz EL, Zhang GL, Brusic V. Olsen LR, et al. Among authors: bagger fo. BMC Med Genomics. 2015;8 Suppl 4(Suppl 4):S1. doi: 10.1186/1755-8794-8-S4-S1. Epub 2015 Dec 9. BMC Med Genomics. 2015. PMID: 26679766 Free PMC article.

8

Deep sequencing of human papillomavirus positive loco-regionally advanced oropharyngeal squamous cell carcinomas reveals novel mutational signature.

Grønhøj C, Jensen DH, Agander T, Kiss K, Høgdall E, Specht L, Bagger FO, Nielsen FC, von Buchwald C. Grønhøj C, et al. Among authors: bagger fo. BMC Cancer. 2018 Jun 7;18(1):640. doi: 10.1186/s12885-018-4567-3. BMC Cancer. 2018. PMID: 29879932 Free PMC article.

9

BloodSpot: a database of healthy and malignant haematopoiesis updated with purified and single cell mRNA sequencing profiles.

Bagger FO, Kinalis S, Rapin N. Bagger FO, et al. Nucleic Acids Res. 2019 Jan 8;47(D1):D881-D885. doi: 10.1093/nar/gky1076. Nucleic Acids Res. 2019. PMID: 30395307 Free PMC article.

10

A Gain-of-Function p53-Mutant Oncogene Promotes Cell Fate Plasticity and Myeloid Leukemia through the Pluripotency Factor FOXH1.

Loizou E, Banito A, Livshits G, Ho YJ, Koche RP, Sánchez-Rivera FJ, Mayle A, Chen CC, Kinalis S, Bagger FO, Kastenhuber ER, Durham BH, Lowe SW. Loizou E, et al. Among authors: bagger fo. Cancer Discov. 2019 Jul;9(7):962-979. doi: 10.1158/2159-8290.CD-18-1391. Epub 2019 May 8. Cancer Discov. 2019. PMID: 31068365 Free PMC article.

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