Town C - Search Results

1

An 'eFP-Seq Browser' for visualizing and exploring RNA sequencing data.

Sullivan A, Purohit PK, Freese NH, Pasha A, Esteban E, Waese J, Wu A, Chen M, Chin CY, Song R, Watharkar SR, Chan AP, Krishnakumar V, Vaughn MW, Town C, Loraine AE, Provart NJ. Sullivan A, et al. Among authors: town c. Plant J. 2019 Nov;100(3):641-654. doi: 10.1111/tpj.14468. Epub 2019 Aug 23. Plant J. 2019. PMID: 31350781 Free PMC article.

2

ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology.

Waese J, Fan J, Pasha A, Yu H, Fucile G, Shi R, Cumming M, Kelley LA, Sternberg MJ, Krishnakumar V, Ferlanti E, Miller J, Town C, Stuerzlinger W, Provart NJ. Waese J, et al. Among authors: town c. Plant Cell. 2017 Aug;29(8):1806-1821. doi: 10.1105/tpc.17.00073. Epub 2017 Aug 14. Plant Cell. 2017. PMID: 28808136 Free PMC article.

3

Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.

Cheng CY, Krishnakumar V, Chan AP, Thibaud-Nissen F, Schobel S, Town CD. Cheng CY, et al. Plant J. 2017 Feb;89(4):789-804. doi: 10.1111/tpj.13415. Epub 2017 Feb 10. Plant J. 2017. PMID: 27862469 Free article.

4

Araport Lives: An Updated Framework for Arabidopsis Bioinformatics.

Pasha A, Subramaniam S, Cleary A, Chen X, Berardini T, Farmer A, Town C, Provart N. Pasha A, et al. Among authors: town c. Plant Cell. 2020 Sep;32(9):2683-2686. doi: 10.1105/tpc.20.00358. Epub 2020 Jul 22. Plant Cell. 2020. PMID: 32699173 Free PMC article. No abstract available.

5

[No title available]

[No authors listed] [No authors listed] PMID: 33589954

6

Polyribosomal RNA-Seq reveals the decreased complexity and diversity of the Arabidopsis translatome.

Zhang X, Rosen BD, Tang H, Krishnakumar V, Town CD. Zhang X, et al. PLoS One. 2015 Feb 23;10(2):e0117699. doi: 10.1371/journal.pone.0117699. eCollection 2015. PLoS One. 2015. PMID: 25706651 Free PMC article.

7

ThaleMine: A Warehouse for Arabidopsis Data Integration and Discovery.

Krishnakumar V, Contrino S, Cheng CY, Belyaeva I, Ferlanti ES, Miller JR, Vaughn MW, Micklem G, Town CD, Chan AP. Krishnakumar V, et al. Plant Cell Physiol. 2017 Jan 1;58(1):e4. doi: 10.1093/pcp/pcw200. Plant Cell Physiol. 2017. PMID: 28013278

8

Plant database resources at The Institute for Genomic Research.

Chan AP, Rabinowicz PD, Quackenbush J, Buell CR, Town CD. Chan AP, et al. Among authors: town cd. Methods Mol Biol. 2007;406:113-36. doi: 10.1007/978-1-59745-535-0_5. Methods Mol Biol. 2007. PMID: 18287690

9

Araport: the Arabidopsis information portal.

Krishnakumar V, Hanlon MR, Contrino S, Ferlanti ES, Karamycheva S, Kim M, Rosen BD, Cheng CY, Moreira W, Mock SA, Stubbs J, Sullivan JM, Krampis K, Miller JR, Micklem G, Vaughn M, Town CD. Krishnakumar V, et al. Nucleic Acids Res. 2015 Jan;43(Database issue):D1003-9. doi: 10.1093/nar/gku1200. Epub 2014 Nov 20. Nucleic Acids Res. 2015. PMID: 25414324 Free PMC article.

10

MTGD: The Medicago truncatula genome database.

Krishnakumar V, Kim M, Rosen BD, Karamycheva S, Bidwell SL, Tang H, Town CD. Krishnakumar V, et al. Plant Cell Physiol. 2015 Jan;56(1):e1. doi: 10.1093/pcp/pcu179. Epub 2014 Nov 28. Plant Cell Physiol. 2015. PMID: 25432968

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