Ning K - Search Results

1

GMrepo: a database of curated and consistently annotated human gut metagenomes.

Wu S, Sun C, Li Y, Wang T, Jia L, Lai S, Yang Y, Luo P, Dai D, Yang YQ, Luo Q, Gao NL, Ning K, He LJ, Zhao XM, Chen WH. Wu S, et al. Among authors: ning k. Nucleic Acids Res. 2020 Jan 8;48(D1):D545-D553. doi: 10.1093/nar/gkz764. Nucleic Acids Res. 2020. PMID: 31504765 Free PMC article.

2

Predicting new indications of compounds with a network pharmacology approach: Liuwei Dihuang Wan as a case study.

Wang YY, Bai H, Zhang RZ, Yan H, Ning K, Zhao XM. Wang YY, et al. Among authors: ning k. Oncotarget. 2017 Sep 30;8(55):93957-93968. doi: 10.18632/oncotarget.21398. eCollection 2017 Nov 7. Oncotarget. 2017. PMID: 29212201 Free PMC article.

3

Computational Molecular Networks and Network Pharmacology.

Ning K, Zhao X, Poetsch A, Chen WH, Yang J. Ning K, et al. Biomed Res Int. 2017;2017:7573904. doi: 10.1155/2017/7573904. Epub 2017 Nov 8. Biomed Res Int. 2017. PMID: 29250548 Free PMC article. No abstract available.

4

GMrepo v2: a curated human gut microbiome database with special focus on disease markers and cross-dataset comparison.

Dai D, Zhu J, Sun C, Li M, Liu J, Wu S, Ning K, He LJ, Zhao XM, Chen WH. Dai D, et al. Among authors: ning k. Nucleic Acids Res. 2022 Jan 7;50(D1):D777-D784. doi: 10.1093/nar/gkab1019. Nucleic Acids Res. 2022. PMID: 34788838 Free PMC article.

5

EXPERT: transfer learning-enabled context-aware microbial community classification.

Chong H, Zha Y, Yu Q, Cheng M, Xiong G, Wang N, Huang X, Huang S, Sun C, Wu S, Chen WH, Coelho LP, Ning K. Chong H, et al. Among authors: ning k. Brief Bioinform. 2022 Nov 19;23(6):bbac396. doi: 10.1093/bib/bbac396. Brief Bioinform. 2022. PMID: 36124759 Free PMC article.

6

Metagenomics and Single-Cell Omics Data Analysis for Human Microbiome Research.

Han M, Yang P, Zhou H, Li H, Ning K. Han M, et al. Among authors: ning k. Adv Exp Med Biol. 2016;939:117-137. doi: 10.1007/978-981-10-1503-8_6. Adv Exp Med Biol. 2016. PMID: 27807746 Review.

7

The Human Gut Virome in Hypertension.

Han M, Yang P, Zhong C, Ning K. Han M, et al. Among authors: ning k. Front Microbiol. 2018 Dec 19;9:3150. doi: 10.3389/fmicb.2018.03150. eCollection 2018. Front Microbiol. 2018. PMID: 30619215 Free PMC article.

8

Meta-network: optimized species-species network analysis for microbial communities.

Yang P, Yu S, Cheng L, Ning K. Yang P, et al. Among authors: ning k. BMC Genomics. 2019 Apr 4;20(Suppl 2):187. doi: 10.1186/s12864-019-5471-1. BMC Genomics. 2019. PMID: 30967118 Free PMC article.

9

Stereotypes About Enterotype: the Old and New Ideas.

Cheng M, Ning K. Cheng M, et al. Among authors: ning k. Genomics Proteomics Bioinformatics. 2019 Feb;17(1):4-12. doi: 10.1016/j.gpb.2018.02.004. Epub 2019 Apr 23. Genomics Proteomics Bioinformatics. 2019. PMID: 31026581 Free PMC article. Review.

10

Meta-Prism: Ultra-fast and highly accurate microbial community structure search utilizing dual indexing and parallel computation.

Zhu M, Kang K, Ning K. Zhu M, et al. Among authors: ning k. Brief Bioinform. 2021 Jan 18;22(1):557-567. doi: 10.1093/bib/bbaa009. Brief Bioinform. 2021. PMID: 32031567

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