Andrade-Navarro MA - Search Results

1

Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases.

Tørresen OK, Star B, Mier P, Andrade-Navarro MA, Bateman A, Jarnot P, Gruca A, Grynberg M, Kajava AV, Promponas VJ, Anisimova M, Jakobsen KS, Linke D. Tørresen OK, et al. Nucleic Acids Res. 2019 Dec 2;47(21):10994-11006. doi: 10.1093/nar/gkz841. Nucleic Acids Res. 2019. PMID: 31584084 Free PMC article. Review.

2

Evolution and function of CAG/polyglutamine repeats in protein-protein interaction networks.

Schaefer MH, Wanker EE, Andrade-Navarro MA. Schaefer MH, et al. Nucleic Acids Res. 2012 May;40(10):4273-87. doi: 10.1093/nar/gks011. Epub 2012 Jan 28. Nucleic Acids Res. 2012. PMID: 22287626 Free PMC article.

3

orthoFind Facilitates the Discovery of Homologous and Orthologous Proteins.

Mier P, Andrade-Navarro MA, Pérez-Pulido AJ. Mier P, et al. PLoS One. 2015 Dec 1;10(12):e0143906. doi: 10.1371/journal.pone.0143906. eCollection 2015. PLoS One. 2015. PMID: 26624019 Free PMC article.

4

FastaHerder2: Four Ways to Research Protein Function and Evolution with Clustering and Clustered Databases.

Mier P, Andrade-Navarro MA. Mier P, et al. J Comput Biol. 2016 Apr;23(4):270-8. doi: 10.1089/cmb.2015.0191. Epub 2016 Feb 1. J Comput Biol. 2016. PMID: 26828375

5

CABRA: Cluster and Annotate Blast Results Algorithm.

Mier P, Andrade-Navarro MA. Mier P, et al. BMC Res Notes. 2016 Apr 30;9:253. doi: 10.1186/s13104-016-2062-y. BMC Res Notes. 2016. PMID: 27129717 Free PMC article.

6

Efficient embedding of complex networks to hyperbolic space via their Laplacian.

Alanis-Lobato G, Mier P, Andrade-Navarro MA. Alanis-Lobato G, et al. Sci Rep. 2016 Jul 22;6:30108. doi: 10.1038/srep30108. Sci Rep. 2016. PMID: 27445157 Free PMC article.

7

Co-regulation of paralog genes in the three-dimensional chromatin architecture.

Ibn-Salem J, Muro EM, Andrade-Navarro MA. Ibn-Salem J, et al. Nucleic Acids Res. 2017 Jan 9;45(1):81-91. doi: 10.1093/nar/gkw813. Epub 2016 Sep 14. Nucleic Acids Res. 2017. PMID: 27634932 Free PMC article.

8

Protein-protein interactions can be predicted using coiled coil co-evolution patterns.

Mier P, Alanis-Lobato G, Andrade-Navarro MA. Mier P, et al. J Theor Biol. 2017 Jan 7;412:198-203. doi: 10.1016/j.jtbi.2016.11.001. Epub 2016 Nov 7. J Theor Biol. 2017. PMID: 27832945 Free article.

9

RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures.

Paladin L, Hirsh L, Piovesan D, Andrade-Navarro MA, Kajava AV, Tosatto SC. Paladin L, et al. Nucleic Acids Res. 2017 Jan 4;45(D1):D308-D312. doi: 10.1093/nar/gkw1136. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899671 Free PMC article.

10

RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures.

Paladin L, Hirsh L, Piovesan D, Andrade-Navarro MA, Kajava AV, Tosatto SCE. Paladin L, et al. Nucleic Acids Res. 2017 Apr 7;45(6):3613. doi: 10.1093/nar/gkw1268. Nucleic Acids Res. 2017. PMID: 27928056 Free PMC article. No abstract available.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

228 results

Search Page

Filters