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Metagenomic Nanopore Sequencing of Influenza Virus Direct from Clinical Respiratory Samples.
Lewandowski K, Xu Y, Pullan ST, Lumley SF, Foster D, Sanderson N, Vaughan A, Morgan M, Bright N, Kavanagh J, Vipond R, Carroll M, Marriott AC, Gooch KE, Andersson M, Jeffery K, Peto TEA, Crook DW, Walker AS, Matthews PC. Lewandowski K, et al. Among authors: vaughan a. J Clin Microbiol. 2019 Dec 23;58(1):e00963-19. doi: 10.1128/JCM.00963-19. Print 2019 Dec 23. J Clin Microbiol. 2019. PMID: 31666364 Free PMC article.
Multilocus sequence typing of Clostridium difficile.
Griffiths D, Fawley W, Kachrimanidou M, Bowden R, Crook DW, Fung R, Golubchik T, Harding RM, Jeffery KJ, Jolley KA, Kirton R, Peto TE, Rees G, Stoesser N, Vaughan A, Walker AS, Young BC, Wilcox M, Dingle KE. Griffiths D, et al. Among authors: vaughan a. J Clin Microbiol. 2010 Mar;48(3):770-8. doi: 10.1128/JCM.01796-09. Epub 2009 Dec 30. J Clin Microbiol. 2010. PMID: 20042623 Free PMC article.
Clinical Clostridium difficile: clonality and pathogenicity locus diversity.
Dingle KE, Griffiths D, Didelot X, Evans J, Vaughan A, Kachrimanidou M, Stoesser N, Jolley KA, Golubchik T, Harding RM, Peto TE, Fawley W, Walker AS, Wilcox M, Crook DW. Dingle KE, et al. Among authors: vaughan a. PLoS One. 2011;6(5):e19993. doi: 10.1371/journal.pone.0019993. Epub 2011 May 19. PLoS One. 2011. PMID: 21625511 Free PMC article.
Molecular epidemiology of Clostridium difficile strains in children compared with that of strains circulating in adults with Clostridium difficile-associated infection.
Stoesser N, Crook DW, Fung R, Griffiths D, Harding RM, Kachrimanidou M, Keshav S, Peto TE, Vaughan A, Walker AS, Dingle KE. Stoesser N, et al. Among authors: vaughan a. J Clin Microbiol. 2011 Nov;49(11):3994-6. doi: 10.1128/JCM.05349-11. Epub 2011 Sep 21. J Clin Microbiol. 2011. PMID: 21940476 Free PMC article.
Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing.
Dingle KE, Didelot X, Ansari MA, Eyre DW, Vaughan A, Griffiths D, Ip CL, Batty EM, Golubchik T, Bowden R, Jolley KA, Hood DW, Fawley WN, Walker AS, Peto TE, Wilcox MH, Crook DW. Dingle KE, et al. Among authors: vaughan a. J Infect Dis. 2013 Feb 15;207(4):675-86. doi: 10.1093/infdis/jis734. Epub 2012 Nov 29. J Infect Dis. 2013. PMID: 23204167 Free PMC article.
Relationship between bacterial strain type, host biomarkers, and mortality in Clostridium difficile infection.
Walker AS, Eyre DW, Wyllie DH, Dingle KE, Griffiths D, Shine B, Oakley S, O'Connor L, Finney J, Vaughan A, Crook DW, Wilcox MH, Peto TE; Infections in Oxfordshire Research Database. Walker AS, et al. Among authors: vaughan a. Clin Infect Dis. 2013 Jun;56(11):1589-600. doi: 10.1093/cid/cit127. Epub 2013 Mar 5. Clin Infect Dis. 2013. PMID: 23463640 Free PMC article.
Diverse sources of C. difficile infection identified on whole-genome sequencing.
Eyre DW, Cule ML, Wilson DJ, Griffiths D, Vaughan A, O'Connor L, Ip CLC, Golubchik T, Batty EM, Finney JM, Wyllie DH, Didelot X, Piazza P, Bowden R, Dingle KE, Harding RM, Crook DW, Wilcox MH, Peto TEA, Walker AS. Eyre DW, et al. Among authors: vaughan a. N Engl J Med. 2013 Sep 26;369(13):1195-205. doi: 10.1056/NEJMoa1216064. N Engl J Med. 2013. PMID: 24066741 Free PMC article.
Asymptomatic Clostridium difficile colonisation and onward transmission.
Eyre DW, Griffiths D, Vaughan A, Golubchik T, Acharya M, O'Connor L, Crook DW, Walker AS, Peto TE. Eyre DW, et al. Among authors: vaughan a. PLoS One. 2013 Nov 12;8(11):e78445. doi: 10.1371/journal.pone.0078445. eCollection 2013. PLoS One. 2013. PMID: 24265690 Free PMC article.
712 results