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Scaling computational genomics to millions of individuals with GPUs.
Taylor-Weiner A, Aguet F, Haradhvala NJ, Gosai S, Anand S, Kim J, Ardlie K, Van Allen EM, Getz G. Taylor-Weiner A, et al. Among authors: gosai s. Genome Biol. 2019 Nov 1;20(1):228. doi: 10.1186/s13059-019-1836-7. Genome Biol. 2019. PMID: 31675989 Free PMC article.
Direct characterization of cis-regulatory elements and functional dissection of complex genetic associations using HCR-FlowFISH.
Reilly SK, Gosai SJ, Gutierrez A, Mackay-Smith A, Ulirsch JC, Kanai M, Mouri K, Berenzy D, Kales S, Butler GM, Gladden-Young A, Bhuiyan RM, Stitzel ML, Finucane HK, Sabeti PC, Tewhey R. Reilly SK, et al. Among authors: gosai sj. Nat Genet. 2021 Aug;53(8):1166-1176. doi: 10.1038/s41588-021-00900-4. Epub 2021 Jul 29. Nat Genet. 2021. PMID: 34326544 Free PMC article.
Author Correction: Direct characterization of cis-regulatory elements and functional dissection of complex genetic associations using HCR-FlowFISH.
Reilly SK, Gosai SJ, Gutierrez A, Mackay-Smith A, Ulirsch JC, Kanai M, Mouri K, Berenzy D, Kales S, Butler GM, Gladden-Young A, Bhuiyan RM, Stitzel ML, Finucane HK, Sabeti PC, Tewhey R. Reilly SK, et al. Among authors: gosai sj. Nat Genet. 2021 Oct;53(10):1517. doi: 10.1038/s41588-021-00943-7. Nat Genet. 2021. PMID: 34497403 No abstract available.
Interrogation of nonconserved human adipose lincRNAs identifies a regulatory role of linc-ADAL in adipocyte metabolism.
Zhang X, Xue C, Lin J, Ferguson JF, Weiner A, Liu W, Han Y, Hinkle C, Li W, Jiang H, Gosai S, Hachet M, Garcia BA, Gregory BD, Soccio RE, Hogenesch JB, Seale P, Li M, Reilly MP. Zhang X, et al. Among authors: gosai s. Sci Transl Med. 2018 Jun 20;10(446):eaar5987. doi: 10.1126/scitranslmed.aar5987. Sci Transl Med. 2018. PMID: 29925637 Free PMC article.
Genome-Wide Approaches for RNA Structure Probing.
Silverman IM, Berkowitz ND, Gosai SJ, Gregory BD. Silverman IM, et al. Adv Exp Med Biol. 2016;907:29-59. doi: 10.1007/978-3-319-29073-7_2. Adv Exp Med Biol. 2016. PMID: 27256381
Functional analysis and transcriptomic profiling of iPSC-derived macrophages and their application in modeling Mendelian disease.
Zhang H, Xue C, Shah R, Bermingham K, Hinkle CC, Li W, Rodrigues A, Tabita-Martinez J, Millar JS, Cuchel M, Pashos EE, Liu Y, Yan R, Yang W, Gosai SJ, VanDorn D, Chou ST, Gregory BD, Morrisey EE, Li M, Rader DJ, Reilly MP. Zhang H, et al. Among authors: gosai sj. Circ Res. 2015 Jun 19;117(1):17-28. doi: 10.1161/CIRCRESAHA.117.305860. Epub 2015 Apr 22. Circ Res. 2015. PMID: 25904599 Free PMC article.
31 results