Li C - Search Results

1

SIMLIN: a bioinformatics tool for prediction of S-sulphenylation in the human proteome based on multi-stage ensemble-learning models.

Wang X, Li C, Li F, Sharma VS, Song J, Webb GI. Wang X, et al. Among authors: li f, li c. BMC Bioinformatics. 2019 Nov 21;20(1):602. doi: 10.1186/s12859-019-3178-6. BMC Bioinformatics. 2019. PMID: 31752668 Free PMC article.

2

Computational characterization of parallel dimeric and trimeric coiled-coils using effective amino acid indices.

Li C, Wang XF, Chen Z, Zhang Z, Song J. Li C, et al. Mol Biosyst. 2015 Feb;11(2):354-60. doi: 10.1039/c4mb00569d. Epub 2014 Dec 1. Mol Biosyst. 2015. PMID: 25435395

3

GlycoMine: a machine learning-based approach for predicting N-, C- and O-linked glycosylation in the human proteome.

Li F, Li C, Wang M, Webb GI, Zhang Y, Whisstock JC, Song J. Li F, et al. Among authors: li c. Bioinformatics. 2015 May 1;31(9):1411-9. doi: 10.1093/bioinformatics/btu852. Epub 2015 Jan 6. Bioinformatics. 2015. PMID: 25568279

4

Critical evaluation of in silico methods for prediction of coiled-coil domains in proteins.

Li C, Ching Han Chang C, Nagel J, Porebski BT, Hayashida M, Akutsu T, Song J, Buckle AM. Li C, et al. Brief Bioinform. 2016 Mar;17(2):270-82. doi: 10.1093/bib/bbv047. Epub 2015 Jul 15. Brief Bioinform. 2016. PMID: 26177815 Free PMC article. Review.

5

Periscope: quantitative prediction of soluble protein expression in the periplasm of Escherichia coli.

Chang CC, Li C, Webb GI, Tey B, Song J, Ramanan RN. Chang CC, et al. Among authors: li c. Sci Rep. 2016 Mar 2;6:21844. doi: 10.1038/srep21844. Sci Rep. 2016. PMID: 26931649 Free PMC article.

6

PolyQ 2.0: an improved version of PolyQ, a database of human polyglutamine proteins.

Li C, Nagel J, Androulakis S, Song J, Buckle AM. Li C, et al. Database (Oxford). 2016 Mar 15;2016:baw021. doi: 10.1093/database/baw021. Print 2016. Database (Oxford). 2016. PMID: 26980520 Free PMC article.

7

KinetochoreDB: a comprehensive online resource for the kinetochore and its related proteins.

Li C, Androulakis S, Buckle AM, Song J. Li C, et al. Database (Oxford). 2016 Mar 17;2016:baw019. doi: 10.1093/database/baw019. Print 2016. Database (Oxford). 2016. PMID: 26989151 Free PMC article.

8

SPAR: a random forest-based predictor for self-interacting proteins with fine-grained domain information.

Liu X, Yang S, Li C, Zhang Z, Song J. Liu X, et al. Among authors: li c. Amino Acids. 2016 Jul;48(7):1655-65. doi: 10.1007/s00726-016-2226-z. Epub 2016 Apr 13. Amino Acids. 2016. PMID: 27074717

9

GlycoMine^struct: a new bioinformatics tool for highly accurate mapping of the human N-linked and O-linked glycoproteomes by incorporating structural features.

Li F, Li C, Revote J, Zhang Y, Webb GI, Li J, Song J, Lithgow T. Li F, et al. Among authors: li c, li j. Sci Rep. 2016 Oct 6;6:34595. doi: 10.1038/srep34595. Sci Rep. 2016. PMID: 27708373 Free PMC article.

10

Comprehensive assessment and performance improvement of effector protein predictors for bacterial secretion systems III, IV and VI.

An Y, Wang J, Li C, Leier A, Marquez-Lago T, Wilksch J, Zhang Y, Webb GI, Song J, Lithgow T. An Y, et al. Among authors: li c. Brief Bioinform. 2018 Jan 1;19(1):148-161. doi: 10.1093/bib/bbw100. Brief Bioinform. 2018. PMID: 27777222

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