Greenleaf WJ - Search Results

1

Single-cell multiomic analysis identifies regulatory programs in mixed-phenotype acute leukemia.

Granja JM, Klemm S, McGinnis LM, Kathiria AS, Mezger A, Corces MR, Parks B, Gars E, Liedtke M, Zheng GXY, Chang HY, Majeti R, Greenleaf WJ. Granja JM, et al. Among authors: greenleaf wj. Nat Biotechnol. 2019 Dec;37(12):1458-1465. doi: 10.1038/s41587-019-0332-7. Epub 2019 Dec 2. Nat Biotechnol. 2019. PMID: 31792411 Free PMC article.

2

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position.

Buenrostro JD, Giresi PG, Zaba LC, Chang HY, Greenleaf WJ. Buenrostro JD, et al. Among authors: greenleaf wj. Nat Methods. 2013 Dec;10(12):1213-8. doi: 10.1038/nmeth.2688. Epub 2013 Oct 6. Nat Methods. 2013. PMID: 24097267 Free PMC article.

3

Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes.

Buenrostro JD, Araya CL, Chircus LM, Layton CJ, Chang HY, Snyder MP, Greenleaf WJ. Buenrostro JD, et al. Among authors: greenleaf wj. Nat Biotechnol. 2014 Jun;32(6):562-8. doi: 10.1038/nbt.2880. Epub 2014 Apr 13. Nat Biotechnol. 2014. PMID: 24727714 Free PMC article.

4

Assaying the epigenome in limited numbers of cells.

Greenleaf WJ. Greenleaf WJ. Methods. 2015 Jan 15;72:51-6. doi: 10.1016/j.ymeth.2014.10.010. Epub 2014 Oct 22. Methods. 2015. PMID: 25461774 Free PMC article. Review.

5

ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide.

Buenrostro JD, Wu B, Chang HY, Greenleaf WJ. Buenrostro JD, et al. Among authors: greenleaf wj. Curr Protoc Mol Biol. 2015 Jan 5;109:21.29.1-21.29.9. doi: 10.1002/0471142727.mb2129s109. Curr Protoc Mol Biol. 2015. PMID: 25559105 Free PMC article.

6

Single-cell chromatin accessibility reveals principles of regulatory variation.

Buenrostro JD, Wu B, Litzenburger UM, Ruff D, Gonzales ML, Snyder MP, Chang HY, Greenleaf WJ. Buenrostro JD, et al. Among authors: greenleaf wj. Nature. 2015 Jul 23;523(7561):486-90. doi: 10.1038/nature14590. Epub 2015 Jun 17. Nature. 2015. PMID: 26083756 Free PMC article.

7

Individuality and variation of personal regulomes in primary human T cells.

Qu K, Zaba LC, Giresi PG, Li R, Longmire M, Kim YH, Greenleaf WJ, Chang HY. Qu K, et al. Among authors: greenleaf wj. Cell Syst. 2015 Jul 29;1(1):51-61. doi: 10.1016/j.cels.2015.06.003. Cell Syst. 2015. PMID: 26251845 Free PMC article.

8

Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution.

Corces MR, Buenrostro JD, Wu B, Greenside PG, Chan SM, Koenig JL, Snyder MP, Pritchard JK, Kundaje A, Greenleaf WJ, Majeti R, Chang HY. Corces MR, et al. Among authors: greenleaf wj. Nat Genet. 2016 Oct;48(10):1193-203. doi: 10.1038/ng.3646. Epub 2016 Aug 15. Nat Genet. 2016. PMID: 27526324 Free PMC article.

9

HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

Mumbach MR, Rubin AJ, Flynn RA, Dai C, Khavari PA, Greenleaf WJ, Chang HY. Mumbach MR, et al. Among authors: greenleaf wj. Nat Methods. 2016 Nov;13(11):919-922. doi: 10.1038/nmeth.3999. Epub 2016 Sep 19. Nat Methods. 2016. PMID: 27643841 Free PMC article.

10

ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing.

Chen X, Shen Y, Draper W, Buenrostro JD, Litzenburger U, Cho SW, Satpathy AT, Carter AC, Ghosh RP, East-Seletsky A, Doudna JA, Greenleaf WJ, Liphardt JT, Chang HY. Chen X, et al. Among authors: greenleaf wj. Nat Methods. 2016 Dec;13(12):1013-1020. doi: 10.1038/nmeth.4031. Epub 2016 Oct 17. Nat Methods. 2016. PMID: 27749837 Free PMC article.

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