Parks B - Search Results

1

Single-cell multiomic analysis identifies regulatory programs in mixed-phenotype acute leukemia.

Granja JM, Klemm S, McGinnis LM, Kathiria AS, Mezger A, Corces MR, Parks B, Gars E, Liedtke M, Zheng GXY, Chang HY, Majeti R, Greenleaf WJ. Granja JM, et al. Among authors: parks b. Nat Biotechnol. 2019 Dec;37(12):1458-1465. doi: 10.1038/s41587-019-0332-7. Epub 2019 Dec 2. Nat Biotechnol. 2019. PMID: 31792411 Free PMC article.

2

Multi-omic profiling reveals widespread dysregulation of innate immunity and hematopoiesis in COVID-19.

Wilk AJ, Lee MJ, Wei B, Parks B, Pi R, Martínez-Colón GJ, Ranganath T, Zhao NQ, Taylor S, Becker W; Stanford COVID-19 Biobank; Jimenez-Morales D, Blomkalns AL, O'Hara R, Ashley EA, Nadeau KC, Yang S, Holmes S, Rabinovitch M, Rogers AJ, Greenleaf WJ, Blish CA. Wilk AJ, et al. Among authors: parks b. J Exp Med. 2021 Aug 2;218(8):e20210582. doi: 10.1084/jem.20210582. Epub 2021 Jun 15. J Exp Med. 2021. PMID: 34128959 Free PMC article.

3

NEAT-seq: simultaneous profiling of intra-nuclear proteins, chromatin accessibility and gene expression in single cells.

Chen AF, Parks B, Kathiria AS, Ober-Reynolds B, Goronzy JJ, Greenleaf WJ. Chen AF, et al. Among authors: parks b. Nat Methods. 2022 May;19(5):547-553. doi: 10.1038/s41592-022-01461-y. Epub 2022 May 2. Nat Methods. 2022. PMID: 35501385 Free PMC article.

4

PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape.

Gamble N, Bradu A, Caldwell JA, McKeever J, Bolonduro O, Ermis E, Kaiser C, Kim Y, Parks B, Klemm S, Greenleaf WJ, Crabtree GR, Koh AS. Gamble N, et al. Among authors: parks b. Nat Immunol. 2024 May;25(5):860-872. doi: 10.1038/s41590-024-01807-y. Epub 2024 Apr 17. Nat Immunol. 2024. PMID: 38632339 Free PMC article.

5

Publisher Correction: PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape.

Gamble N, Bradu A, Caldwell JA, McKeever J, Bolonduro O, Ermis E, Kaiser C, Kim Y, Parks B, Klemm S, Greenleaf WJ, Crabtree GR, Koh AS. Gamble N, et al. Among authors: parks b. Nat Immunol. 2024 Jun;25(6):1123. doi: 10.1038/s41590-024-01864-3. Nat Immunol. 2024. PMID: 38755325 Free PMC article. No abstract available.

6

Single-molecule states link transcription factor binding to gene expression.

Doughty BR, Hinks MM, Schaepe JM, Marinov GK, Thurm AR, Rios-Martinez C, Parks BE, Tan Y, Marklund E, Dubocanin D, Bintu L, Greenleaf WJ. Doughty BR, et al. Among authors: parks be. Nature. 2024 Dec;636(8043):745-754. doi: 10.1038/s41586-024-08219-w. Epub 2024 Nov 20. Nature. 2024. PMID: 39567683

7

Single-molecule chromatin configurations link transcription factor binding to expression in human cells.

Doughty BR, Hinks MM, Schaepe JM, Marinov GK, Thurm AR, Rios-Martinez C, Parks BE, Tan Y, Marklund E, Dubocanin D, Bintu L, Greenleaf WJ. Doughty BR, et al. bioRxiv [Preprint]. 2024 Feb 4:2024.02.02.578660. doi: 10.1101/2024.02.02.578660. bioRxiv. 2024. Update in: Nature. 2024 Dec;636(8043):745-754. doi: 10.1038/s41586-024-08219-w PMID: 38352517 Free PMC article. Updated. Preprint.

8

Physiological consequences of Aldolase C deficiency during lactation.

Votava JA, Fan J, Parks BW. Votava JA, et al. Among authors: parks bw. PLoS One. 2024 Dec 12;19(12):e0315719. doi: 10.1371/journal.pone.0315719. eCollection 2024. PLoS One. 2024. PMID: 39666708 Free PMC article.

9

Liver-specific deletion of Agpat5 protects against liquid sucrose-induced hyperinsulinemia and glucose intolerance.

Michorowska S, Vogel KR, Jain R, St Clair SL, Simcox JA, Parks BW. Michorowska S, et al. Among authors: parks bw. Biochem Biophys Res Commun. 2024 Dec 31;741:151059. doi: 10.1016/j.bbrc.2024.151059. Epub 2024 Nov 23. Biochem Biophys Res Commun. 2024. PMID: 39608054 Free article.

10

Seasonal patterns of neurogenesis in European starlings (Sturnus vulgaris) are region- and sex-specific.

Aitken SDT, Parks BMB, Sollows M, Barber CA, Phillmore LS. Aitken SDT, et al. Among authors: parks bmb. J Neuroendocrinol. 2024 Oct 16:e13455. doi: 10.1111/jne.13455. Online ahead of print. J Neuroendocrinol. 2024. PMID: 39411781

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