Dorman K - Search Results

1

MetaOmGraph: a workbench for interactive exploratory data analysis of large expression datasets.

Singh U, Hur M, Dorman K, Wurtele ES. Singh U, et al. Among authors: dorman k. Nucleic Acids Res. 2020 Feb 28;48(4):e23. doi: 10.1093/nar/gkz1209. Nucleic Acids Res. 2020. PMID: 31956905 Free PMC article.

2

phylostratr: a framework for phylostratigraphy.

Arendsee Z, Li J, Singh U, Seetharam A, Dorman K, Wurtele ES. Arendsee Z, et al. Among authors: dorman k. Bioinformatics. 2019 Oct 1;35(19):3617-3627. doi: 10.1093/bioinformatics/btz171. Bioinformatics. 2019. PMID: 30873536

3

AmpliCI: a high-resolution model-based approach for denoising Illumina amplicon data.

Peng X, Dorman KS. Peng X, et al. Bioinformatics. 2021 Jan 29;36(21):5151-5158. doi: 10.1093/bioinformatics/btaa648. Bioinformatics. 2021. PMID: 32697845 Free PMC article.

4

mlegp: statistical analysis for computer models of biological systems using R.

Dancik GM, Dorman KS. Dancik GM, et al. Bioinformatics. 2008 Sep 1;24(17):1966-7. doi: 10.1093/bioinformatics/btn329. Epub 2008 Jul 17. Bioinformatics. 2008. PMID: 18635570 Free PMC article.

5

Reptile: representative tiling for short read error correction.

Yang X, Dorman KS, Aluru S. Yang X, et al. Bioinformatics. 2010 Oct 15;26(20):2526-33. doi: 10.1093/bioinformatics/btq468. Epub 2010 Aug 16. Bioinformatics. 2010. PMID: 20834037

6

Accurate estimation of molecular counts from amplicon sequence data with unique molecular identifiers.

Peng X, Dorman KS. Peng X, et al. Bioinformatics. 2023 Jan 1;39(1):btad002. doi: 10.1093/bioinformatics/btad002. Bioinformatics. 2023. PMID: 36610988 Free PMC article.

7

p65 signaling dynamics drive the developmental progression of hematopoietic stem and progenitor cells through cell cycle regulation.

Campbell CA, Calderon R, Pavani G, Cheng X, Barakat R, Snella E, Liu F, Peng X, Essner JJ, Dorman KS, McGrail M, Gadue P, French DL, Espin-Palazon R. Campbell CA, et al. Among authors: dorman ks. Nat Commun. 2024 Sep 6;15(1):7787. doi: 10.1038/s41467-024-51922-5. Nat Commun. 2024. PMID: 39242546 Free PMC article.

8

cBrother: relaxing parental tree assumptions for Bayesian recombination detection.

Fang F, Ding J, Minin VN, Suchard MA, Dorman KS. Fang F, et al. Bioinformatics. 2007 Feb 15;23(4):507-8. doi: 10.1093/bioinformatics/btl613. Epub 2006 Dec 4. Bioinformatics. 2007. PMID: 17145740

9

Next-generation yeast-two-hybrid analysis with Y2H-SCORES identifies novel interactors of the MLA immune receptor.

Velásquez-Zapata V, Elmore JM, Banerjee S, Dorman KS, Wise RP. Velásquez-Zapata V, et al. PLoS Comput Biol. 2021 Apr 2;17(4):e1008890. doi: 10.1371/journal.pcbi.1008890. eCollection 2021 Apr. PLoS Comput Biol. 2021. PMID: 33798202 Free PMC article.

10

Coarse-graining protein structures into their dynamic communities with DCI, a dynamic community identifier.

Kumar A, Khade PM, Dorman KS, Jernigan RL. Kumar A, et al. Bioinformatics. 2022 May 13;38(10):2727-2733. doi: 10.1093/bioinformatics/btac159. Bioinformatics. 2022. PMID: 35561187 Free PMC article.

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