Basu U - Search Results

1

Regulation of long non-coding RNAs and genome dynamics by the RNA surveillance machinery.

Nair L, Chung H, Basu U. Nair L, et al. Among authors: basu u. Nat Rev Mol Cell Biol. 2020 Mar;21(3):123-136. doi: 10.1038/s41580-019-0209-0. Epub 2020 Feb 4. Nat Rev Mol Cell Biol. 2020. PMID: 32020081 Free PMC article. Review.

2

Noncoding RNA transcription targets AID to divergently transcribed loci in B cells.

Pefanis E, Wang J, Rothschild G, Lim J, Chao J, Rabadan R, Economides AN, Basu U. Pefanis E, et al. Among authors: basu u. Nature. 2014 Oct 16;514(7522):389-93. doi: 10.1038/nature13580. Epub 2014 Aug 6. Nature. 2014. PMID: 25119026 Free PMC article.

3

RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity.

Pefanis E, Wang J, Rothschild G, Lim J, Kazadi D, Sun J, Federation A, Chao J, Elliott O, Liu ZP, Economides AN, Bradner JE, Rabadan R, Basu U. Pefanis E, et al. Among authors: basu u. Cell. 2015 May 7;161(4):774-89. doi: 10.1016/j.cell.2015.04.034. Cell. 2015. PMID: 25957685 Free PMC article.

4

RNA Exosome and Non-coding RNA-Coupled Mechanisms in AID-Mediated Genomic Alterations.

Laffleur B, Basu U, Lim J. Laffleur B, et al. Among authors: basu u. J Mol Biol. 2017 Oct 27;429(21):3230-3241. doi: 10.1016/j.jmb.2016.12.021. Epub 2017 Jan 7. J Mol Biol. 2017. PMID: 28069372 Free PMC article. Review.

5

Biology of RNA Surveillance in Development and Disease.

Laffleur B, Basu U. Laffleur B, et al. Among authors: basu u. Trends Cell Biol. 2019 May;29(5):428-445. doi: 10.1016/j.tcb.2019.01.004. Epub 2019 Feb 10. Trends Cell Biol. 2019. PMID: 30755352 Free PMC article. Review.

6

Noncoding RNA transcription alters chromosomal topology to promote isotype-specific class switch recombination.

Rothschild G, Zhang W, Lim J, Giri PK, Laffleur B, Chen Y, Fang M, Chen Y, Nair L, Liu ZP, Deng H, Hammarström L, Wang J, Basu U. Rothschild G, et al. Among authors: basu u. Sci Immunol. 2020 Feb 7;5(44):eaay5864. doi: 10.1126/sciimmunol.aay5864. Sci Immunol. 2020. PMID: 32034089 Free PMC article.

7

Proteasomal Regulation of Mammalian SPT16 in Controlling Transcription.

Kaja A, Adhikari A, Karmakar S, Zhang W, Rothschild G, Basu U, Batra SK, Davie JK, Bhaumik SR. Kaja A, et al. Among authors: basu u. Mol Cell Biol. 2021 Mar 24;41(4):e00452-20. doi: 10.1128/MCB.00452-20. Print 2021 Mar 24. Mol Cell Biol. 2021. PMID: 33526453 Free PMC article.

8

Noncoding RNA processing by DIS3 regulates chromosomal architecture and somatic hypermutation in B cells.

Laffleur B, Lim J, Zhang W, Chen Y, Pefanis E, Bizarro J, Batista CR, Wu L, Economides AN, Wang J, Basu U. Laffleur B, et al. Among authors: basu u. Nat Genet. 2021 Feb;53(2):230-242. doi: 10.1038/s41588-020-00772-0. Epub 2021 Feb 1. Nat Genet. 2021. PMID: 33526923 Free PMC article.

9

Mechanism of noncoding RNA-associated N⁶-methyladenosine recognition by an RNA processing complex during IgH DNA recombination.

Nair L, Zhang W, Laffleur B, Jha MK, Lim J, Lee H, Wu L, Alvarez NS, Liu ZP, Munteanu EL, Swayne T, Hanna JH, Ding L, Rothschild G, Basu U. Nair L, et al. Among authors: basu u. Mol Cell. 2021 Oct 7;81(19):3949-3964.e7. doi: 10.1016/j.molcel.2021.07.037. Epub 2021 Aug 26. Mol Cell. 2021. PMID: 34450044 Free PMC article.

10

Identification of RNA-DNA Hybrids Associated with R-Loops at the IgH Switch Sequence in Activated B Cells.

Lim J, Laffleur B, Basu U, Yu K. Lim J, et al. Among authors: basu u. Methods Mol Biol. 2022;2528:55-66. doi: 10.1007/978-1-0716-2477-7_5. Methods Mol Biol. 2022. PMID: 35704185 Free PMC article.

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