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Page 1
Eleven grand challenges in single-cell data science.
Lähnemann D, Köster J, Szczurek E, McCarthy DJ, Hicks SC, Robinson MD, Vallejos CA, Campbell KR, Beerenwinkel N, Mahfouz A, Pinello L, Skums P, Stamatakis A, Attolini CS, Aparicio S, Baaijens J, Balvert M, Barbanson B, Cappuccio A, Corleone G, Dutilh BE, Florescu M, Guryev V, Holmer R, Jahn K, Lobo TJ, Keizer EM, Khatri I, Kielbasa SM, Korbel JO, Kozlov AM, Kuo TH, Lelieveldt BPF, Mandoiu II, Marioni JC, Marschall T, Mölder F, Niknejad A, Rączkowska A, Reinders M, Ridder J, Saliba AE, Somarakis A, Stegle O, Theis FJ, Yang H, Zelikovsky A, McHardy AC, Raphael BJ, Shah SP, Schönhuth A. Lähnemann D, et al. Among authors: zelikovsky a. Genome Biol. 2020 Feb 7;21(1):31. doi: 10.1186/s13059-020-1926-6. Genome Biol. 2020. PMID: 32033589 Free PMC article. Review.
Scalable heuristics for design of DNA probe arrays.
Kahng AB, Măndoiu II, Pevzner PA, Reda S, Zelikovsky AZ. Kahng AB, et al. Among authors: zelikovsky az. J Comput Biol. 2004;11(2-3):429-47. doi: 10.1089/1066527041410391. J Comput Biol. 2004. PMID: 15285900
Inferring viral quasispecies spectra from 454 pyrosequencing reads.
Astrovskaya I, Tork B, Mangul S, Westbrooks K, Măndoiu I, Balfe P, Zelikovsky A. Astrovskaya I, et al. Among authors: zelikovsky a. BMC Bioinformatics. 2011;12 Suppl 6(Suppl 6):S1. doi: 10.1186/1471-2105-12-S6-S1. Epub 2011 Jul 28. BMC Bioinformatics. 2011. PMID: 21989211 Free PMC article.
Reconstructing viral quasispecies from NGS amplicon reads.
Mancuso N, Tork B, Skums P, Ganova-Raeva L, Măndoiu I, Zelikovsky A. Mancuso N, et al. Among authors: zelikovsky a. In Silico Biol. 2011-2012;11(5-6):237-49. doi: 10.3233/ISB-2012-0458. In Silico Biol. 2011. PMID: 23202425
ILP-based maximum likelihood genome scaffolding.
Lindsay J, Salooti H, Măndoiu I, Zelikovsky A. Lindsay J, et al. Among authors: zelikovsky a. BMC Bioinformatics. 2014;15 Suppl 9(Suppl 9):S9. doi: 10.1186/1471-2105-15-S9-S9. Epub 2014 Sep 10. BMC Bioinformatics. 2014. PMID: 25253180 Free PMC article.
105 results