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Computational saturation mutagenesis to predict structural consequences of systematic mutations in the beta subunit of RNA polymerase in Mycobacterium leprae.
Vedithi SC, Rodrigues CHM, Portelli S, Skwark MJ, Das M, Ascher DB, Blundell TL, Malhotra S. Vedithi SC, et al. Among authors: skwark mj. Comput Struct Biotechnol J. 2020 Jan 17;18:271-286. doi: 10.1016/j.csbj.2020.01.002. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32042379 Free PMC article.
Mycobacterium abscessus pathogenesis identified by phenogenomic analyses.
Boeck L, Burbaud S, Skwark M, Pearson WH, Sangen J, Wuest AW, Marshall EKP, Weimann A, Everall I, Bryant JM, Malhotra S, Bannerman BP, Kierdorf K, Blundell TL, Dionne MS, Parkhill J, Andres Floto R. Boeck L, et al. Nat Microbiol. 2022 Sep;7(9):1431-1441. doi: 10.1038/s41564-022-01204-x. Epub 2022 Aug 25. Nat Microbiol. 2022. PMID: 36008617 Free PMC article.
Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation.
Sillitoe I, Andreeva A, Blundell TL, Buchan DWA, Finn RD, Gough J, Jones D, Kelley LA, Paysan-Lafosse T, Lam SD, Murzin AG, Pandurangan AP, Salazar GA, Skwark MJ, Sternberg MJE, Velankar S, Orengo C. Sillitoe I, et al. Among authors: skwark mj. Nucleic Acids Res. 2020 Jan 8;48(D1):D314-D319. doi: 10.1093/nar/gkz967. Nucleic Acids Res. 2020. PMID: 31733063 Free PMC article.
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