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De novo assembly of the cattle reference genome with single-molecule sequencing.
Rosen BD, Bickhart DM, Schnabel RD, Koren S, Elsik CG, Tseng E, Rowan TN, Low WY, Zimin A, Couldrey C, Hall R, Li W, Rhie A, Ghurye J, McKay SD, Thibaud-Nissen F, Hoffman J, Murdoch BM, Snelling WM, McDaneld TG, Hammond JA, Schwartz JC, Nandolo W, Hagen DE, Dreischer C, Schultheiss SJ, Schroeder SG, Phillippy AM, Cole JB, Van Tassell CP, Liu G, Smith TPL, Medrano JF. Rosen BD, et al. Among authors: cole jb. Gigascience. 2020 Mar 1;9(3):giaa021. doi: 10.1093/gigascience/giaa021. Gigascience. 2020. PMID: 32191811 Free PMC article.
Distribution and location of genetic effects for dairy traits.
Cole JB, VanRaden PM, O'Connell JR, Van Tassell CP, Sonstegard TS, Schnabel RD, Taylor JF, Wiggans GR. Cole JB, et al. J Dairy Sci. 2009 Jun;92(6):2931-46. doi: 10.3168/jds.2008-1762. J Dairy Sci. 2009. PMID: 19448026 Free article.
Effect of sample stratification on dairy GWAS results.
Ma L, Wiggans GR, Wang S, Sonstegard TS, Yang J, Crooker BA, Cole JB, Van Tassell CP, Lawlor TJ, Da Y. Ma L, et al. Among authors: cole jb. BMC Genomics. 2012 Oct 6;13:536. doi: 10.1186/1471-2164-13-536. BMC Genomics. 2012. PMID: 23039970 Free PMC article.
Genome-wide association study for birth weight in Nellore cattle points to previously described orthologous genes affecting human and bovine height.
Utsunomiya YT, do Carmo AS, Carvalheiro R, Neves HH, Matos MC, Zavarez LB, Pérez O'Brien AM, Sölkner J, McEwan JC, Cole JB, Van Tassell CP, Schenkel FS, da Silva MV, Porto Neto LR, Sonstegard TS, Garcia JF. Utsunomiya YT, et al. Among authors: cole jb. BMC Genet. 2013 Jun 13;14:52. doi: 10.1186/1471-2156-14-52. BMC Genet. 2013. PMID: 23758625 Free PMC article.
Genome-wide mapping of loci explaining variance in scrotal circumference in Nellore cattle.
Utsunomiya YT, Carmo AS, Neves HH, Carvalheiro R, Matos MC, Zavarez LB, Ito PK, Pérez O'Brien AM, Sölkner J, Porto-Neto LR, Schenkel FS, McEwan J, Cole JB, da Silva MV, Van Tassell CP, Sonstegard TS, Garcia JF. Utsunomiya YT, et al. Among authors: cole jb. PLoS One. 2014 Feb 18;9(2):e88561. doi: 10.1371/journal.pone.0088561. eCollection 2014. PLoS One. 2014. PMID: 24558400 Free PMC article.
Accuracy of genomic predictions in Bos indicus (Nellore) cattle.
Neves HH, Carvalheiro R, O'Brien AM, Utsunomiya YT, do Carmo AS, Schenkel FS, Sölkner J, McEwan JC, Van Tassell CP, Cole JB, da Silva MV, Queiroz SA, Sonstegard TS, Garcia JF. Neves HH, et al. Among authors: cole jb. Genet Sel Evol. 2014 Feb 27;46(1):17. doi: 10.1186/1297-9686-46-17. Genet Sel Evol. 2014. PMID: 24575732 Free PMC article.
329 results