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The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems.
Pawlowski J, Kelly-Quinn M, Altermatt F, Apothéloz-Perret-Gentil L, Beja P, Boggero A, Borja A, Bouchez A, Cordier T, Domaizon I, Feio MJ, Filipe AF, Fornaroli R, Graf W, Herder J, van der Hoorn B, Iwan Jones J, Sagova-Mareckova M, Moritz C, Barquín J, Piggott JJ, Pinna M, Rimet F, Rinkevich B, Sousa-Santos C, Specchia V, Trobajo R, Vasselon V, Vitecek S, Zimmerman J, Weigand A, Leese F, Kahlert M. Pawlowski J, et al. Among authors: vasselon v. Sci Total Environ. 2018 Oct 1;637-638:1295-1310. doi: 10.1016/j.scitotenv.2018.05.002. Epub 2018 May 22. Sci Total Environ. 2018. PMID: 29801222 Free article. Review.
Monitoring the ecological status of rivers with diatom eDNA metabarcoding: A comparison of taxonomic markers and analytical approaches for the inference of a molecular diatom index.
Apothéloz-Perret-Gentil L, Bouchez A, Cordier T, Cordonier A, Guéguen J, Rimet F, Vasselon V, Pawlowski J. Apothéloz-Perret-Gentil L, et al. Among authors: vasselon v. Mol Ecol. 2021 Jul;30(13):2959-2968. doi: 10.1111/mec.15646. Epub 2020 Nov 14. Mol Ecol. 2021. PMID: 32979002 Free PMC article.
Diat.barcode, an open-access curated barcode library for diatoms.
Rimet F, Gusev E, Kahlert M, Kelly MG, Kulikovskiy M, Maltsev Y, Mann DG, Pfannkuchen M, Trobajo R, Vasselon V, Zimmermann J, Bouchez A. Rimet F, et al. Among authors: vasselon v. Sci Rep. 2019 Oct 22;9(1):15116. doi: 10.1038/s41598-019-51500-6. Sci Rep. 2019. PMID: 31641158 Free PMC article.
Cyprus' diatom diversity and the association of environmental and anthropogenic influences for ecological assessment of rivers using DNA metabarcoding.
Pissaridou P, Vasselon V, Christou A, Chonova T, Papatheodoulou A, Drakou K, Tziortzis I, Dörflinger G, Rimet F, Bouchez A, Vasquez MI. Pissaridou P, et al. Among authors: vasselon v. Chemosphere. 2021 Jun;272:129814. doi: 10.1016/j.chemosphere.2021.129814. Epub 2021 Feb 1. Chemosphere. 2021. PMID: 33582508
20 results