Quang D - Search Results

1

Three-Plane-assembled Deep Learning Segmentation of Gliomas.

Wu S, Li H, Quang D, Guan Y. Wu S, et al. Among authors: quang d. Radiol Artif Intell. 2020 Mar 11;2(2):e190011. doi: 10.1148/ryai.2020190011. Radiol Artif Intell. 2020. PMID: 32280947 Free PMC article.

2

YAMDA: thousandfold speedup of EM-based motif discovery using deep learning libraries and GPU.

Quang D, Guan Y, Parker SCJ. Quang D, et al. Bioinformatics. 2018 Oct 15;34(20):3578-3580. doi: 10.1093/bioinformatics/bty396. Bioinformatics. 2018. PMID: 29790915 Free PMC article.

3

Network Propagation Predicts Drug Synergy in Cancers.

Li H, Li T, Quang D, Guan Y. Li H, et al. Among authors: quang d. Cancer Res. 2018 Sep 15;78(18):5446-5457. doi: 10.1158/0008-5472.CAN-18-0740. Epub 2018 Jul 27. Cancer Res. 2018. PMID: 30054332

4

Anchor: trans-cell type prediction of transcription factor binding sites.

Li H, Quang D, Guan Y. Li H, et al. Among authors: quang d. Genome Res. 2019 Feb;29(2):281-292. doi: 10.1101/gr.237156.118. Epub 2018 Dec 19. Genome Res. 2019. PMID: 30567711 Free PMC article.

5

Single-cell ATAC-Seq in human pancreatic islets and deep learning upscaling of rare cells reveals cell-specific type 2 diabetes regulatory signatures.

Rai V, Quang DX, Erdos MR, Cusanovich DA, Daza RM, Narisu N, Zou LS, Didion JP, Guan Y, Shendure J, Parker SCJ, Collins FS. Rai V, et al. Mol Metab. 2020 Feb;32:109-121. doi: 10.1016/j.molmet.2019.12.006. Epub 2019 Dec 20. Mol Metab. 2020. PMID: 32029221 Free PMC article.

6

Machine Learning to Predict Anti-Tumor Necrosis Factor Drug Responses of Rheumatoid Arthritis Patients by Integrating Clinical and Genetic Markers.

Guan Y, Zhang H, Quang D, Wang Z, Parker SCJ, Pappas DA, Kremer JM, Zhu F. Guan Y, et al. Among authors: quang d. Arthritis Rheumatol. 2019 Dec;71(12):1987-1996. doi: 10.1002/art.41056. Epub 2019 Nov 4. Arthritis Rheumatol. 2019. PMID: 31342661 Free article.

7

Motif signatures in stretch enhancers are enriched for disease-associated genetic variants.

Quang DX, Erdos MR, Parker SCJ, Collins FS. Quang DX, et al. Epigenetics Chromatin. 2015 Jul 16;8:23. doi: 10.1186/s13072-015-0015-7. eCollection 2015. Epigenetics Chromatin. 2015. PMID: 26180553 Free PMC article.

8

EXTREME: an online EM algorithm for motif discovery.

Quang D, Xie X. Quang D, et al. Bioinformatics. 2014 Jun 15;30(12):1667-73. doi: 10.1093/bioinformatics/btu093. Epub 2014 Feb 14. Bioinformatics. 2014. PMID: 24532725 Free PMC article.

9

DANN: a deep learning approach for annotating the pathogenicity of genetic variants.

Quang D, Chen Y, Xie X. Quang D, et al. Bioinformatics. 2015 Mar 1;31(5):761-3. doi: 10.1093/bioinformatics/btu703. Epub 2014 Oct 22. Bioinformatics. 2015. PMID: 25338716 Free PMC article.

10

FactorNet: A deep learning framework for predicting cell type specific transcription factor binding from nucleotide-resolution sequential data.

Quang D, Xie X. Quang D, et al. Methods. 2019 Aug 15;166:40-47. doi: 10.1016/j.ymeth.2019.03.020. Epub 2019 Mar 26. Methods. 2019. PMID: 30922998 Free PMC article.

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