Rhee S - Search Results

1

Logic-based analysis of gene expression data predicts association between TNF, TGFB1 and EGF pathways in basal-like breast cancer.

Jo K, Santos-Buitrago B, Kim M, Rhee S, Talcott C, Kim S. Jo K, et al. Among authors: rhee s. Methods. 2020 Jul 1;179:89-100. doi: 10.1016/j.ymeth.2020.05.008. Epub 2020 May 20. Methods. 2020. PMID: 32445696

2

Information theoretic sub-network mining characterizes breast cancer subtypes in terms of cancer core mechanisms.

Park J, Hur B, Rhee S, Lim S, Kim MS, Kim K, Han W, Kim S. Park J, et al. Among authors: rhee s. J Bioinform Comput Biol. 2016 Oct;14(5):1644002. doi: 10.1142/S0219720016440029. Epub 2016 Aug 29. J Bioinform Comput Biol. 2016. PMID: 27712195

3

MONTI: A Multi-Omics Non-negative Tensor Decomposition Framework for Gene-Level Integrative Analysis.

Jung I, Kim M, Rhee S, Lim S, Kim S. Jung I, et al. Among authors: rhee s. Front Genet. 2021 Sep 10;12:682841. doi: 10.3389/fgene.2021.682841. eCollection 2021. Front Genet. 2021. PMID: 34567063 Free PMC article.

4

BioVLAB-MMIA-NGS: microRNA-mRNA integrated analysis using high-throughput sequencing data.

Chae H, Rhee S, Nephew KP, Kim S. Chae H, et al. Among authors: rhee s. Bioinformatics. 2015 Jan 15;31(2):265-7. doi: 10.1093/bioinformatics/btu614. Epub 2014 Sep 29. Bioinformatics. 2015. PMID: 25270639 Free article.

5

Comprehensive and critical evaluation of individualized pathway activity measurement tools on pan-cancer data.

Lim S, Lee S, Jung I, Rhee S, Kim S. Lim S, et al. Among authors: rhee s. Brief Bioinform. 2020 Jan 17;21(1):36-46. doi: 10.1093/bib/bby097. Brief Bioinform. 2020. PMID: 30462155

6

Corrigendum: MONTI: A Multi-Omics Non-Negative Tensor Decomposition Framework for Gene-Level Integrative Analysis.

Jung I, Kim M, Rhee S, Lim S, Kim S. Jung I, et al. Among authors: rhee s. Front Genet. 2021 Oct 25;12:778490. doi: 10.3389/fgene.2021.778490. eCollection 2021. Front Genet. 2021. PMID: 34759964 Free PMC article.

7

Literature-based condition-specific miRNA-mRNA target prediction.

Oh M, Rhee S, Moon JH, Chae H, Lee S, Kang J, Kim S. Oh M, et al. Among authors: rhee s. PLoS One. 2017 Mar 31;12(3):e0174999. doi: 10.1371/journal.pone.0174999. eCollection 2017. PLoS One. 2017. PMID: 28362846 Free PMC article.

8

Genome-wide analysis and modeling of DNA methylation susceptibility in 30 breast cancer cell lines by using CpG flanking sequences.

An J, Kim K, Rhee SM, Chae H, Nephew KP, Kim S. An J, et al. Among authors: rhee sm. J Bioinform Comput Biol. 2013 Jun;11(3):1341003. doi: 10.1142/S0219720013410035. J Bioinform Comput Biol. 2013. PMID: 23796180

9

Transcriptional Network Analysis Reveals Drought Resistance Mechanisms of AP2/ERF Transgenic Rice.

Ahn H, Jung I, Shin SJ, Park J, Rhee S, Kim JK, Jung W, Kwon HB, Kim S. Ahn H, et al. Among authors: rhee s. Front Plant Sci. 2017 Jun 15;8:1044. doi: 10.3389/fpls.2017.01044. eCollection 2017. Front Plant Sci. 2017. PMID: 28663756 Free PMC article.

10

GeneclusterViz: a tool for conserved gene cluster visualization, exploration and analysis.

Pejaver VR, An J, Rhee S, Bhan A, Choi JH, Liu B, Lee H, Brown PJ, Kysela D, Brun YV, Kim S. Pejaver VR, et al. Among authors: rhee s. Bioinformatics. 2012 Jun 1;28(11):1527-9. doi: 10.1093/bioinformatics/bts177. Epub 2012 Apr 11. Bioinformatics. 2012. PMID: 22495752 Free PMC article.

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