Talcott C - Search Results

1

Logic-based analysis of gene expression data predicts association between TNF, TGFB1 and EGF pathways in basal-like breast cancer.

Jo K, Santos-Buitrago B, Kim M, Rhee S, Talcott C, Kim S. Jo K, et al. Among authors: talcott c. Methods. 2020 Jul 1;179:89-100. doi: 10.1016/j.ymeth.2020.05.008. Epub 2020 May 20. Methods. 2020. PMID: 32445696

2

Epidermal Growth Factor Signaling towards Proliferation: Modeling and Logic Inference Using Forward and Backward Search.

Riesco A, Santos-Buitrago B, De Las Rivas J, Knapp M, Santos-García G, Talcott C. Riesco A, et al. Among authors: talcott c. Biomed Res Int. 2017;2017:1809513. doi: 10.1155/2017/1809513. Epub 2017 Jan 16. Biomed Res Int. 2017. PMID: 28191459 Free PMC article.

3

Soft Set Theory for Decision Making in Computational Biology under Incomplete Information.

Santos-Buitrago B, Riesco A, Knapp M, Alcantud JCR, Santos-GARCíA G, Talcott C. Santos-Buitrago B, et al. Among authors: talcott c. IEEE Access. 2019;7:18183-18193. doi: 10.1109/ACCESS.2019.2896947. Epub 2019 Feb 7. IEEE Access. 2019. PMID: 31788396 Free PMC article.

4

Pathway logic modeling of protein functional domains in signal transduction.

Talcott C, Eker S, Knapp M, Lincoln P, Laderoute K. Talcott C, et al. Pac Symp Biocomput. 2004:568-80. Pac Symp Biocomput. 2004. PMID: 14992534 Free article.

5

Computing minimal nutrient sets from metabolic networks via linear constraint solving.

Eker S, Krummenacker M, Shearer AG, Tiwari A, Keseler IM, Talcott C, Karp PD. Eker S, et al. Among authors: talcott c. BMC Bioinformatics. 2013 Mar 27;14:114. doi: 10.1186/1471-2105-14-114. BMC Bioinformatics. 2013. PMID: 23537498 Free PMC article.

6

Integrated analysis of breast cancer cell lines reveals unique signaling pathways.

Heiser LM, Wang NJ, Talcott CL, Laderoute KR, Knapp M, Guan Y, Hu Z, Ziyad S, Weber BL, Laquerre S, Jackson JR, Wooster RF, Kuo WL, Gray JW, Spellman PT. Heiser LM, et al. Genome Biol. 2009;10(3):R31. doi: 10.1186/gb-2009-10-3-r31. Epub 2009 Mar 25. Genome Biol. 2009. PMID: 19317917 Free PMC article.

7

Combining cheminformatics methods and pathway analysis to identify molecules with whole-cell activity against Mycobacterium tuberculosis.

Sarker M, Talcott C, Madrid P, Chopra S, Bunin BA, Lamichhane G, Freundlich JS, Ekins S. Sarker M, et al. Among authors: talcott c. Pharm Res. 2012 Aug;29(8):2115-27. doi: 10.1007/s11095-012-0741-5. Epub 2012 Apr 4. Pharm Res. 2012. PMID: 22477069 Free PMC article.

8

Computational databases, pathway and cheminformatics tools for tuberculosis drug discovery.

Ekins S, Freundlich JS, Choi I, Sarker M, Talcott C. Ekins S, et al. Among authors: talcott c. Trends Microbiol. 2011 Feb;19(2):65-74. doi: 10.1016/j.tim.2010.10.005. Epub 2010 Dec 2. Trends Microbiol. 2011. PMID: 21129975 Free PMC article. Review.

9

Combining Metabolite-Based Pharmacophores with Bayesian Machine Learning Models for Mycobacterium tuberculosis Drug Discovery.

Ekins S, Madrid PB, Sarker M, Li SG, Mittal N, Kumar P, Wang X, Stratton TP, Zimmerman M, Talcott C, Bourbon P, Travers M, Yadav M, Freundlich JS. Ekins S, et al. Among authors: talcott c. PLoS One. 2015 Oct 30;10(10):e0141076. doi: 10.1371/journal.pone.0141076. eCollection 2015. PLoS One. 2015. PMID: 26517557 Free PMC article.

10

In silico systems biology approaches for the identification of antimicrobial targets.

Sarker M, Talcott C, Galande AK. Sarker M, et al. Among authors: talcott c. Methods Mol Biol. 2013;993:13-30. doi: 10.1007/978-1-62703-342-8_2. Methods Mol Biol. 2013. PMID: 23568461 Review.

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