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Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings.
Almudi I, Vizueta J, Wyatt CDR, de Mendoza A, Marlétaz F, Firbas PN, Feuda R, Masiero G, Medina P, Alcaina-Caro A, Cruz F, Gómez-Garrido J, Gut M, Alioto TS, Vargas-Chavez C, Davie K, Misof B, González J, Aerts S, Lister R, Paps J, Rozas J, Sánchez-Gracia A, Irimia M, Maeso I, Casares F. Almudi I, et al. Among authors: aerts s. Nat Commun. 2020 May 26;11(1):2631. doi: 10.1038/s41467-020-16284-8. Nat Commun. 2020. PMID: 32457347 Free PMC article.
Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic.
Verfaillie A, Svetlichnyy D, Imrichova H, Davie K, Fiers M, Kalender Atak Z, Hulselmans G, Christiaens V, Aerts S. Verfaillie A, et al. Among authors: aerts s. Genome Res. 2016 Jul;26(7):882-95. doi: 10.1101/gr.204149.116. Epub 2016 May 18. Genome Res. 2016. PMID: 27197205 Free PMC article.
dachshund Potentiates Hedgehog Signaling during Drosophila Retinogenesis.
Brás-Pereira C, Potier D, Jacobs J, Aerts S, Casares F, Janody F. Brás-Pereira C, et al. Among authors: aerts s. PLoS Genet. 2016 Jul 21;12(7):e1006204. doi: 10.1371/journal.pgen.1006204. eCollection 2016 Jul. PLoS Genet. 2016. PMID: 27442438 Free PMC article.
The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes.
Jacobs J, Atkins M, Davie K, Imrichova H, Romanelli L, Christiaens V, Hulselmans G, Potier D, Wouters J, Taskiran II, Paciello G, González-Blas CB, Koldere D, Aibar S, Halder G, Aerts S. Jacobs J, et al. Among authors: aerts s. Nat Genet. 2018 Jul;50(7):1011-1020. doi: 10.1038/s41588-018-0140-x. Epub 2018 Jun 4. Nat Genet. 2018. PMID: 29867222 Free PMC article.
cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data.
Bravo González-Blas C, Minnoye L, Papasokrati D, Aibar S, Hulselmans G, Christiaens V, Davie K, Wouters J, Aerts S. Bravo González-Blas C, et al. Among authors: aerts s. Nat Methods. 2019 May;16(5):397-400. doi: 10.1038/s41592-019-0367-1. Epub 2019 Apr 8. Nat Methods. 2019. PMID: 30962623 Free PMC article.
179 results