Shimada Y - Search Results

1

A fully automated deep learning pipeline for high-throughput colony segmentation and classification.

Carl SH, Duempelmann L, Shimada Y, Bühler M. Carl SH, et al. Among authors: shimada y. Biol Open. 2020 Jun 23;9(6):bio052936. doi: 10.1242/bio.052936. Biol Open. 2020. PMID: 32487517 Free PMC article.

2

[No title available]

[No authors listed] [No authors listed] PMID: 34004693

3

Schizosaccharomyces pombe reporter strains for relative quantitative assessment of heterochromatin silencing.

Shimada Y, Bühler M. Shimada Y, et al. Yeast. 2012 Aug;29(8):335-41. doi: 10.1002/yea.2913. Epub 2012 Jul 20. Yeast. 2012. PMID: 22815068

4

Inheritance of a Phenotypically Neutral Epimutation Evokes Gene Silencing in Later Generations.

Duempelmann L, Mohn F, Shimada Y, Oberti D, Andriollo A, Lochs S, Bühler M. Duempelmann L, et al. Among authors: shimada y. Mol Cell. 2019 May 2;74(3):534-541.e4. doi: 10.1016/j.molcel.2019.02.009. Epub 2019 Mar 18. Mol Cell. 2019. PMID: 30898439 Free PMC article.

5

An enhancer screen identifies new suppressors of small-RNA-mediated epigenetic gene silencing.

Shimada Y, Carl SH, Skribbe M, Flury V, Kuzdere T, Kempf G, Bühler M. Shimada Y, et al. PLoS Genet. 2021 Jun 22;17(6):e1009645. doi: 10.1371/journal.pgen.1009645. eCollection 2021 Jun. PLoS Genet. 2021. PMID: 34157021 Free PMC article.

6

Noncoding RNAs prevent spreading of a repressive histone mark.

Keller C, Kulasegaran-Shylini R, Shimada Y, Hotz HR, Bühler M. Keller C, et al. Among authors: shimada y. Nat Struct Mol Biol. 2013 Aug;20(8):994-1000. doi: 10.1038/nsmb.2619. Epub 2013 Jul 21. Nat Struct Mol Biol. 2013. PMID: 23872991

7

The RNA-induced transcriptional silencing complex targets chromatin exclusively via interacting with nascent transcripts.

Shimada Y, Mohn F, Bühler M. Shimada Y, et al. Genes Dev. 2016 Dec 1;30(23):2571-2580. doi: 10.1101/gad.292599.116. Epub 2016 Dec 9. Genes Dev. 2016. PMID: 27941123 Free PMC article.

8

Dicer and Hsp104 function in a negative feedback loop to confer robustness to environmental stress.

Oberti D, Biasini A, Kirschmann MA, Genoud C, Stunnenberg R, Shimada Y, Bühler M. Oberti D, et al. Among authors: shimada y. Cell Rep. 2015 Jan 6;10(1):47-61. doi: 10.1016/j.celrep.2014.12.006. Epub 2014 Dec 24. Cell Rep. 2015. PMID: 25543137 Free article.

9

The Paf1 complex represses small-RNA-mediated epigenetic gene silencing.

Kowalik KM, Shimada Y, Flury V, Stadler MB, Batki J, Bühler M. Kowalik KM, et al. Among authors: shimada y. Nature. 2015 Apr 9;520(7546):248-252. doi: 10.1038/nature14337. Epub 2015 Mar 25. Nature. 2015. PMID: 25807481 Free PMC article.

10

The Histone Acetyltransferase Mst2 Protects Active Chromatin from Epigenetic Silencing by Acetylating the Ubiquitin Ligase Brl1.

Flury V, Georgescu PR, Iesmantavicius V, Shimada Y, Kuzdere T, Braun S, Bühler M. Flury V, et al. Among authors: shimada y. Mol Cell. 2017 Jul 20;67(2):294-307.e9. doi: 10.1016/j.molcel.2017.05.026. Epub 2017 Jun 22. Mol Cell. 2017. PMID: 28648780 Free PMC article.

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