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Classification in biological networks with hypergraphlet kernels.
Lugo-Martinez J, Zeiberg D, Gaudelet T, Malod-Dognin N, Przulj N, Radivojac P. Lugo-Martinez J, et al. Among authors: gaudelet t. Bioinformatics. 2021 May 17;37(7):1000-1007. doi: 10.1093/bioinformatics/btaa768. Bioinformatics. 2021. PMID: 32886115 Free PMC article.
Utilizing graph machine learning within drug discovery and development.
Gaudelet T, Day B, Jamasb AR, Soman J, Regep C, Liu G, Hayter JBR, Vickers R, Roberts C, Tang J, Roblin D, Blundell TL, Bronstein MM, Taylor-King JP. Gaudelet T, et al. Brief Bioinform. 2021 Nov 5;22(6):bbab159. doi: 10.1093/bib/bbab159. Brief Bioinform. 2021. PMID: 34013350 Free PMC article.
RECOVER identifies synergistic drug combinations in vitro through sequential model optimization.
Bertin P, Rector-Brooks J, Sharma D, Gaudelet T, Anighoro A, Gross T, Martínez-Peña F, Tang EL, Suraj MS, Regep C, Hayter JBR, Korablyov M, Valiante N, van der Sloot A, Tyers M, Roberts CES, Bronstein MM, Lairson LL, Taylor-King JP, Bengio Y. Bertin P, et al. Among authors: gaudelet t. Cell Rep Methods. 2023 Oct 23;3(10):100599. doi: 10.1016/j.crmeth.2023.100599. Epub 2023 Oct 4. Cell Rep Methods. 2023. PMID: 37797618 Free PMC article.