Zapata L - Search Results

1

Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells.

Tarbier M, Mackowiak SD, Frade J, Catuara-Solarz S, Biryukova I, Gelali E, Menéndez DB, Zapata L, Ossowski S, Bienko M, Gallant CJ, Friedländer MR. Tarbier M, et al. Among authors: zapata l. Nat Commun. 2020 Oct 28;11(1):5445. doi: 10.1038/s41467-020-19011-5. Nat Commun. 2020. PMID: 33116115 Free PMC article.

2

Analysis of a long-term outbreak of XDR Pseudomonas aeruginosa: a molecular epidemiological study.

Willmann M, Bezdan D, Zapata L, Susak H, Vogel W, Schröppel K, Liese J, Weidenmaier C, Autenrieth IB, Ossowski S, Peter S. Willmann M, et al. Among authors: zapata l. J Antimicrob Chemother. 2015 May;70(5):1322-30. doi: 10.1093/jac/dku546. Epub 2015 Jan 11. J Antimicrob Chemother. 2015. PMID: 25583750

3

Jitterbug: somatic and germline transposon insertion detection at single-nucleotide resolution.

Hénaff E, Zapata L, Casacuberta JM, Ossowski S. Hénaff E, et al. Among authors: zapata l. BMC Genomics. 2015 Oct 12;16:768. doi: 10.1186/s12864-015-1975-5. BMC Genomics. 2015. PMID: 26459856 Free PMC article.

4

Identification of Gene Mutations and Fusion Genes in Patients with Sézary Syndrome.

Prasad A, Rabionet R, Espinet B, Zapata L, Puiggros A, Melero C, Puig A, Sarria-Trujillo Y, Ossowski S, Garcia-Muret MP, Estrach T, Servitje O, Lopez-Lerma I, Gallardo F, Pujol RM, Estivill X. Prasad A, et al. Among authors: zapata l. J Invest Dermatol. 2016 Jul;136(7):1490-1499. doi: 10.1016/j.jid.2016.03.024. Epub 2016 Mar 30. J Invest Dermatol. 2016. PMID: 27039262 Free article.

5

Chromosome-level assembly of Arabidopsis thaliana Ler reveals the extent of translocation and inversion polymorphisms.

Zapata L, Ding J, Willing EM, Hartwig B, Bezdan D, Jiao WB, Patel V, Velikkakam James G, Koornneef M, Ossowski S, Schneeberger K. Zapata L, et al. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):E4052-60. doi: 10.1073/pnas.1607532113. Epub 2016 Jun 27. Proc Natl Acad Sci U S A. 2016. PMID: 27354520 Free PMC article.

6

Signatures of positive selection reveal a universal role of chromatin modifiers as cancer driver genes.

Zapata L, Susak H, Drechsel O, Friedländer MR, Estivill X, Ossowski S. Zapata L, et al. Sci Rep. 2017 Oct 13;7(1):13124. doi: 10.1038/s41598-017-12888-1. Sci Rep. 2017. PMID: 29030609 Free PMC article.

7

Negative selection in tumor genome evolution acts on essential cellular functions and the immunopeptidome.

Zapata L, Pich O, Serrano L, Kondrashov FA, Ossowski S, Schaefer MH. Zapata L, et al. Genome Biol. 2018 May 31;19(1):67. doi: 10.1186/s13059-018-1434-0. Genome Biol. 2018. PMID: 29855388 Free PMC article.

8

Allele balance bias identifies systematic genotyping errors and false disease associations.

Muyas F, Bosio M, Puig A, Susak H, Domènech L, Escaramis G, Zapata L, Demidov G, Estivill X, Rabionet R, Ossowski S. Muyas F, et al. Among authors: zapata l. Hum Mutat. 2019 Jan;40(1):115-126. doi: 10.1002/humu.23674. Epub 2018 Nov 23. Hum Mutat. 2019. PMID: 30353964 Free PMC article.

9

The rate and spectrum of mosaic mutations during embryogenesis revealed by RNA sequencing of 49 tissues.

Muyas F, Zapata L, Guigó R, Ossowski S. Muyas F, et al. Among authors: zapata l. Genome Med. 2020 May 27;12(1):49. doi: 10.1186/s13073-020-00746-1. Genome Med. 2020. PMID: 32460841 Free PMC article.

10

The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana.

Wijnker E, Velikkakam James G, Ding J, Becker F, Klasen JR, Rawat V, Rowan BA, de Jong DF, de Snoo CB, Zapata L, Huettel B, de Jong H, Ossowski S, Weigel D, Koornneef M, Keurentjes JJ, Schneeberger K. Wijnker E, et al. Among authors: zapata l. Elife. 2013 Dec 17;2:e01426. doi: 10.7554/eLife.01426. Elife. 2013. PMID: 24347547 Free PMC article.

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