Xu H - Search Results

1

KinaseMD: kinase mutations and drug response database.

Hu R, Xu H, Jia P, Zhao Z. Hu R, et al. Among authors: xu h. Nucleic Acids Res. 2021 Jan 8;49(D1):D552-D561. doi: 10.1093/nar/gkaa945. Nucleic Acids Res. 2021. PMID: 33137204 Free PMC article.

2

6mA-Finder: a novel online tool for predicting DNA N6-methyladenine sites in genomes.

Xu H, Hu R, Jia P, Zhao Z. Xu H, et al. Bioinformatics. 2020 May 1;36(10):3257-3259. doi: 10.1093/bioinformatics/btaa113. Bioinformatics. 2020. PMID: 32091591 Free PMC article.

3

Deep4mC: systematic assessment and computational prediction for DNA N4-methylcytosine sites by deep learning.

Xu H, Jia P, Zhao Z. Xu H, et al. Brief Bioinform. 2021 May 20;22(3):bbaa099. doi: 10.1093/bib/bbaa099. Brief Bioinform. 2021. PMID: 32578842 Free PMC article.

4

DeepVISP: Deep Learning for Virus Site Integration Prediction and Motif Discovery.

Xu H, Jia P, Zhao Z. Xu H, et al. Adv Sci (Weinh). 2021 Mar 8;8(9):2004958. doi: 10.1002/advs.202004958. eCollection 2021 May. Adv Sci (Weinh). 2021. PMID: 33977077 Free PMC article.

5

NetBCE: An Interpretable Deep Neural Network for Accurate Prediction of Linear B-cell Epitopes.

Xu H, Zhao Z. Xu H, et al. Genomics Proteomics Bioinformatics. 2022 Oct;20(5):1002-1012. doi: 10.1016/j.gpb.2022.11.009. Epub 2022 Dec 13. Genomics Proteomics Bioinformatics. 2022. PMID: 36526218 Free PMC article.

6

ImmuneApp for HLA-I epitope prediction and immunopeptidome analysis.

Xu H, Hu R, Dong X, Kuang L, Zhang W, Tu C, Li Z, Zhao Z. Xu H, et al. Nat Commun. 2024 Oct 16;15(1):8926. doi: 10.1038/s41467-024-53296-0. Nat Commun. 2024. PMID: 39414796 Free PMC article.

7

MetaDegron: multimodal feature-integrated protein language model for predicting E3 ligase targeted degrons.

Zheng M, Lin S, Chen K, Hu R, Wang L, Zhao Z, Xu H. Zheng M, et al. Among authors: xu h. Brief Bioinform. 2024 Sep 23;25(6):bbae519. doi: 10.1093/bib/bbae519. Brief Bioinform. 2024. PMID: 39431517 Free PMC article.

8

PTMD: A Database of Human Disease-associated Post-translational Modifications.

Xu H, Wang Y, Lin S, Deng W, Peng D, Cui Q, Xue Y. Xu H, et al. Genomics Proteomics Bioinformatics. 2018 Aug;16(4):244-251. doi: 10.1016/j.gpb.2018.06.004. Epub 2018 Sep 21. Genomics Proteomics Bioinformatics. 2018. PMID: 30244175 Free PMC article.

9

iEKPD 2.0: an update with rich annotations for eukaryotic protein kinases, protein phosphatases and proteins containing phosphoprotein-binding domains.

Guo Y, Peng D, Zhou J, Lin S, Wang C, Ning W, Xu H, Deng W, Xue Y. Guo Y, et al. Among authors: xu h. Nucleic Acids Res. 2019 Jan 8;47(D1):D344-D350. doi: 10.1093/nar/gky1063. Nucleic Acids Res. 2019. PMID: 30380109 Free PMC article.

10

Database Resources of the BIG Data Center in 2019.

BIG Data Center Members. BIG Data Center Members. Nucleic Acids Res. 2019 Jan 8;47(D1):D8-D14. doi: 10.1093/nar/gky993. Nucleic Acids Res. 2019. PMID: 30365034 Free PMC article.

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