Hatakeyama M - Search Results

1

De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium-Resistant Genes in East Asian Genotypes.

Shimizu KK, Copetti D, Okada M, Wicker T, Tameshige T, Hatakeyama M, Shimizu-Inatsugi R, Aquino C, Nishimura K, Kobayashi F, Murata K, Kuo T, Delorean E, Poland J, Haberer G, Spannagl M, Mayer KFX, Gutierrez-Gonzalez J, Muehlbauer GJ, Monat C, Himmelbach A, Padmarasu S, Mascher M, Walkowiak S, Nakazaki T, Ban T, Kawaura K, Tsuji H, Pozniak C, Stein N, Sese J, Nasuda S, Handa H. Shimizu KK, et al. Among authors: hatakeyama m. Plant Cell Physiol. 2021 Mar 25;62(1):8-27. doi: 10.1093/pcp/pcaa152. Plant Cell Physiol. 2021. PMID: 33244607 Free PMC article.

2

Genome sequencing of Metrosideros polymorpha (Myrtaceae), a dominant species in various habitats in the Hawaiian Islands with remarkable phenotypic variations.

Izuno A, Hatakeyama M, Nishiyama T, Tamaki I, Shimizu-Inatsugi R, Sasaki R, Shimizu KK, Isagi Y. Izuno A, et al. Among authors: hatakeyama m. J Plant Res. 2016 Jul;129(4):727-736. doi: 10.1007/s10265-016-0822-3. Epub 2016 Apr 6. J Plant Res. 2016. PMID: 27052216

3

Gene duplication and genetic exchange drive the evolution of S-RNase-based self-incompatibility in Petunia.

Kubo K, Paape T, Hatakeyama M, Entani T, Takara A, Kajihara K, Tsukahara M, Shimizu-Inatsugi R, Shimizu KK, Takayama S. Kubo K, et al. Among authors: hatakeyama m. Nat Plants. 2015 Jan 8;1:14005. doi: 10.1038/nplants.2014.5. Nat Plants. 2015. PMID: 27246052

4

Conserved but Attenuated Parental Gene Expression in Allopolyploids: Constitutive Zinc Hyperaccumulation in the Allotetraploid Arabidopsis kamchatica.

Paape T, Hatakeyama M, Shimizu-Inatsugi R, Cereghetti T, Onda Y, Kenta T, Sese J, Shimizu KK. Paape T, et al. Among authors: hatakeyama m. Mol Biol Evol. 2016 Nov;33(11):2781-2800. doi: 10.1093/molbev/msw141. Epub 2016 Jul 12. Mol Biol Evol. 2016. PMID: 27413047 Free PMC article.

5

The population genomic signature of environmental association and gene flow in an ecologically divergent tree species Metrosideros polymorpha (Myrtaceae).

Izuno A, Kitayama K, Onoda Y, Tsujii Y, Hatakeyama M, Nagano AJ, Honjo MN, Shimizu-Inatsugi R, Kudoh H, Shimizu KK, Isagi Y. Izuno A, et al. Among authors: hatakeyama m. Mol Ecol. 2017 Mar;26(6):1515-1532. doi: 10.1111/mec.14016. Epub 2017 Feb 8. Mol Ecol. 2017. PMID: 28099775

6

Multiple hybrid de novo genome assembly of finger millet, an orphan allotetraploid crop.

Hatakeyama M, Aluri S, Balachadran MT, Sivarajan SR, Patrignani A, Grüter S, Poveda L, Shimizu-Inatsugi R, Baeten J, Francoijs KJ, Nataraja KN, Reddy YAN, Phadnis S, Ravikumar RL, Schlapbach R, Sreeman SM, Shimizu KK. Hatakeyama M, et al. DNA Res. 2018 Feb 1;25(1):39-47. doi: 10.1093/dnares/dsx036. DNA Res. 2018. PMID: 28985356 Free PMC article.

7

Patterns of polymorphism and selection in the subgenomes of the allopolyploid Arabidopsis kamchatica.

Paape T, Briskine RV, Halstead-Nussloch G, Lischer HEL, Shimizu-Inatsugi R, Hatakeyama M, Tanaka K, Nishiyama T, Sabirov R, Sese J, Shimizu KK. Paape T, et al. Among authors: hatakeyama m. Nat Commun. 2018 Sep 25;9(1):3909. doi: 10.1038/s41467-018-06108-1. Nat Commun. 2018. PMID: 30254374 Free PMC article.

8

Homeolog expression quantification methods for allopolyploids.

Kuo TCY, Hatakeyama M, Tameshige T, Shimizu KK, Sese J. Kuo TCY, et al. Among authors: hatakeyama m. Brief Bioinform. 2020 Mar 23;21(2):395-407. doi: 10.1093/bib/bby121. Brief Bioinform. 2020. PMID: 30590436 Free PMC article. Review.

9

Updated Genome Assembly and Annotation for Metrosideros polymorpha, an Emerging Model Tree Species of Ecological Divergence.

Izuno A, Wicker T, Hatakeyama M, Copetti D, Shimizu KK. Izuno A, et al. Among authors: hatakeyama m. G3 (Bethesda). 2019 Nov 5;9(11):3513-3520. doi: 10.1534/g3.119.400643. G3 (Bethesda). 2019. PMID: 31540972 Free PMC article.

10

Genet assignment and population structure analysis in a clonal forest-floor herb, Cardamine leucantha, using RAD-seq.

Tsujimoto M, Araki KS, Honjo MN, Yasugi M, Nagano AJ, Akama S, Hatakeyama M, Shimizu-Inatsugi R, Sese J, Shimizu KK, Kudoh H. Tsujimoto M, et al. Among authors: hatakeyama m. AoB Plants. 2019 Dec 20;12(1):plz080. doi: 10.1093/aobpla/plz080. eCollection 2020 Feb. AoB Plants. 2019. PMID: 32002176 Free PMC article.

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